Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07150 ATGGAAGCCACATTTCCCAAGATGGAAATCTTCACCCAAAAGGAATTGGCAACTTGTTTGCAAGAAATGGCAACAGGATCAAAGTTTTTGGACAGTACAATTATAAGAGGTTCTCACCCATTCACTGCTTCTCATCATGTTCATGTATTAAGAAGTGAGTCAAATTCTACTCCAATGAAAGAAGAGGTGCCTTTAGCTGCCTTGAATAGTCACATCCAAGCAAAGTTCAATGATCATGAAGACATGGAGAAAGGGAAAGCAAAAAACCAATCCGTTTCTAGATTCAATTCTATCTCCACTCCTGGTGTCCCAGCCTCCTCAGATATAAAACATAGCTCTATTCCTCTAAATCTTCTGGAAACTCTCCCATCATTAACCATAGCACCAGTTTCTGATGAGCCAGCTGCTTCTTTATCCTCTTCTTCTGCCACACCCAAATTTCCAAACCTGACTTTGTTTTTGCAGGAACCCTCCATGCTGTACACATCATCCTCACATATGAAAAGTAGTGAAGTCATGTCAGCAACTTCAGACCCCACATACCATGTGTCCCAATTTGGCCAAACCCAGCATCAAACAGGTAGTGATTCACACAGAATGAATAAGAATCTGACAAATCTGCGGTACAAGTCTTTCAATGACAATTGGTTGAGTACCACTAAGACTCAGCCTTTGAAGTATAGTGGAAGAGGCAAGCTGTTTAAAGGGGTGAGGCAGAGACATTGGGGGAAATGGGTTGCTGAGATTAGGTTACCAAGAAACAGGACAAGGGTTTGGTTAGGGACTTTTGACACAGCTGAAGATGCTGCCATTGCATATGACACAGCAGCATACATACTAAGAGGAGAATATGCTCAGTTGAACTTTCCAGATCTAAAGCATGTAATTCAGGCCAATTCTTTGAATGGAACTACTGCTGCACTTGTGGAGGCAAAACTGCAAGCAATATCACAAGGTGTTGTTTCTTCTCATAGGAAGCCTGCTGATTCACCAGCAGGGTCAAACAATAAGCACATCACTGCCATCAAGGAATGGCAGTTTGATATAGAGAGCAGGGTTGGACTTGGAGGTGACACAATTGAGAGAAGCAAAAATACAAATCATGAGATATCAGATGTGGAAGGTGTTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATCATTTGGGATGAACTTTTAGTCTCTGATTCATGA 1197 0.4185 MEATFPKMEIFTQKELATCLQEMATGSKFLDSTIIRGSHPFTASHHVHVLRSESNSTPMKEEVPLAALNSHIQAKFNDHEDMEKGKAKNQSVSRFNSISTPGVPASSDIKHSSIPLNLLETLPSLTIAPVSDEPAASLSSSSATPKFPNLTLFLQEPSMLYTSSSHMKSSEVMSATSDPTYHVSQFGQTQHQTGSDSHRMNKNLTNLRYKSFNDNWLSTTKTQPLKYSGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGEYAQLNFPDLKHVIQANSLNGTTAALVEAKLQAISQGVVSSHRKPADSPAGSNNKHITAIKEWQFDIESRVGLGGDTIERSKNTNHEISDVEGVQLSRMPSLDMDIIWDELLVSDS. 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07150 398 MobiDBLite consensus disorder prediction 84 107 - -
Seca7g07150 398 CDD AP2 232 292 IPR001471 GO:0003700|GO:0006355
Seca7g07150 398 SUPERFAMILY DNA-binding domain 233 291 IPR016177 GO:0003677
Seca7g07150 398 PRINTS Ethylene responsive element binding protein signature 234 245 IPR001471 GO:0003700|GO:0006355
Seca7g07150 398 PRINTS Ethylene responsive element binding protein signature 256 272 IPR001471 GO:0003700|GO:0006355
Seca7g07150 398 FunFam Ethylene-responsive transcription factor 2 232 291 - -
Seca7g07150 398 Gene3D AP2/ERF domain 233 291 IPR036955 GO:0003700|GO:0006355
Seca7g07150 398 ProSiteProfiles AP2/ERF domain profile. 233 290 IPR001471 GO:0003700|GO:0006355
Seca7g07150 398 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 81 393 - -
Seca7g07150 398 MobiDBLite consensus disorder prediction 89 107 - -
Seca7g07150 398 SMART rav1_2 233 296 IPR001471 GO:0003700|GO:0006355
Seca7g07150 398 Pfam AP2 domain 234 282 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07150 Seca-Chr7 174379861 174381239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07150 112 393 AP2-EREBP Transcription Factor Family AT4G13620 47.241 7.15e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Seca7g07150 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07150 - - gmx:100820013 538.11