Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07148 ATGGAGGATGTTCAGGTTTTTGGTCTGTGGTCAAGTCCATTTACCCAGAGGGTTGTGTGGGCACTAAAATTAAAGGGTGTGACTTACGAGTACATTGCTGAAGATCTTGCAAACAAGAGCGACCTGTTATTGCAATACAATCCAATCTACAACAAGGTTCCTGTTCTTGTACATAATGGAAAACCAATAGCAGAGTCAATGGTGATTCTTGAATACATTGAGGAGACTTGGCCTGAGATCCCTCTGTTGCCCCAAAACCCTCATCAGAGGTCCAATGTTCGTTTCTGGTCAAAATTCATCGACGAAAAGACAATGCACATGATCAATTTTTTTCGCTATGATGGAGAACAACAAGAGAGGGCAATGGAAGAGACTCTGGAAATCTTAAGAGTCATTGAAAAGGAAAGTGGGGTTGGTGAAAAGAAATTCATAGGTGGGAACACCATTGGTTTGGCAGACCTTGCCTTGGGATGGGTTGCTCATACTCTTGTGGCCATGGAAGATGTGGTTGGAGTCAAGTTCATCACAGCTGATGCCTTTCCTCACCTTCACTCTTGGGTAGGGAATTTCTTGGAAATTCCTTCTATAGAAGAGGGTAGGGAATTTCTTGGAAATTCCTTCTATAGAAGAGAATCTCCCACCTCATGA 648 0.429 MEDVQVFGLWSSPFTQRVVWALKLKGVTYEYIAEDLANKSDLLLQYNPIYNKVPVLVHNGKPIAESMVILEYIEETWPEIPLLPQNPHQRSNVRFWSKFIDEKTMHMINFFRYDGEQQERAMEETLEILRVIEKESGVGEKKFIGGNTIGLADLALGWVAHTLVAMEDVVGVKFITADAFPHLHSWVGNFLEIPSIEEGREFLGNSFYRRESPTS. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07148 215 CDD GST_C_Tau 87 198 IPR045074 GO:0004364|GO:0006749
Seca7g07148 215 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Seca7g07148 215 Gene3D - 86 201 - -
Seca7g07148 215 CDD GST_N_Tau 4 77 - -
Seca7g07148 215 SUPERFAMILY Thioredoxin-like 3 104 IPR036249 -
Seca7g07148 215 SFLD Main.3: Omega- and Tau-like 1 198 IPR045073 -
Seca7g07148 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Seca7g07148 215 SUPERFAMILY GST C-terminal domain-like 75 198 IPR036282 -
Seca7g07148 215 Gene3D Glutaredoxin 1 85 - -
Seca7g07148 215 SFLD Main (cytGST) 1 198 - -
Seca7g07148 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Seca7g07148 215 Pfam Glutathione S-transferase, C-terminal domain 109 194 IPR004046 -
Seca7g07148 215 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 192 IPR045073 -
Seca7g07148 215 FunFam Tau class glutathione S-transferase 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07148 Seca-Chr7 174366946 174368921 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07148 2 191 Glutathione S-transferase Gene Family AT2G29420 47.644 8.72e-63 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07148 K00799 - tcc:18602840 267.314