LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g07141	ATGGCAGAGGTGAAGATACATGGATTTTGGTATAGTCCTTTTACTTTGAGGGTTGTATGGACCCTAAAGCTAAAGGATATAGCATATGAGAACATAGAGGAAGACCGTTTCAACAAAAGTCCTCAACTTCTTGAATACAACCCAGTGCACAAAAAGACTCCGGTGCTAGTTCATAATGGAAAACCCATATGTGAATCAATGATCATTGTTGAATACATTGATGAGATATGGCCACACAATCCATTGCTTCCTGTGGATCCCTATGAGAAAGCTGTGGCACGGTTTTGGGTTAAATATGTGGATGACATGTTTTCTACAGTTGCTGCTTTCTTTCGTAGCAATGTTGGTGAAGGGCGAGAGAATGCCATAAGAGATATAGGGGAAAGACTCAGAGTTATTGAGGATCAGTGTTTAGGTGATCAGAATAAATTTTTTGGGGGAGAAACTATCAACATTGTAGACATAGCTCTTGGGTCTTTTGCCAAGTTTATTGAGGTTTCGGAAGATATGTTTGAAGTGAAGGTCATAGAAGCTGAGAAATTTCCTCACTTGCACTTATGGTTTAATAATTTCAAGGAGGTTCCTGTCATCTCTGAAAACACCCCTGACCAGGAGAAATTGGTAGCTTTTATTAAGTCTCTTAGAGAAAAAATGTATGGATCTTCATAA	669	0.3886	MAEVKIHGFWYSPFTLRVVWTLKLKDIAYENIEEDRFNKSPQLLEYNPVHKKTPVLVHNGKPICESMIIVEYIDEIWPHNPLLPVDPYEKAVARFWVKYVDDMFSTVAAFFRSNVGEGRENAIRDIGERLRVIEDQCLGDQNKFFGGETINIVDIALGSFAKFIEVSEDMFEVKVIEAEKFPHLHLWFNNFKEVPVISENTPDQEKLVAFIKSLREKMYGSS.	223

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g07141	222	PRINTS	Omega-class glutathione S-transferase signature	77	91	IPR005442	GO:0004364\|GO:0005737
	Seca7g07141	222	PRINTS	Omega-class glutathione S-transferase signature	144	163	IPR005442	GO:0004364\|GO:0005737
	Seca7g07141	222	PRINTS	Omega-class glutathione S-transferase signature	2	17	IPR005442	GO:0004364\|GO:0005737
	Seca7g07141	222	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	2	81	IPR004045	-
	Seca7g07141	222	CDD	GST_N_Tau	4	77	-	-
	Seca7g07141	222	SUPERFAMILY	GST C-terminal domain-like	75	218	IPR036282	-
	Seca7g07141	222	Gene3D	-	86	222	-	-
	Seca7g07141	222	SUPERFAMILY	Thioredoxin-like	4	104	IPR036249	-
	Seca7g07141	222	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	7	208	IPR045073	-
	Seca7g07141	222	Gene3D	Glutaredoxin	1	85	-	-

Showing 1 to 10 of 18 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g07141	Seca-Chr7	174319876	174321067	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca7g07141	3	221	Glutathione S-transferase Gene Family	AT2G29460	42.727	1.09e-57	180

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g07141	K00799		-	gmx:547584	337.421

Showing 1 to 1 of 1 entries