Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07141 ATGGCAGAGGTGAAGATACATGGATTTTGGTATAGTCCTTTTACTTTGAGGGTTGTATGGACCCTAAAGCTAAAGGATATAGCATATGAGAACATAGAGGAAGACCGTTTCAACAAAAGTCCTCAACTTCTTGAATACAACCCAGTGCACAAAAAGACTCCGGTGCTAGTTCATAATGGAAAACCCATATGTGAATCAATGATCATTGTTGAATACATTGATGAGATATGGCCACACAATCCATTGCTTCCTGTGGATCCCTATGAGAAAGCTGTGGCACGGTTTTGGGTTAAATATGTGGATGACATGTTTTCTACAGTTGCTGCTTTCTTTCGTAGCAATGTTGGTGAAGGGCGAGAGAATGCCATAAGAGATATAGGGGAAAGACTCAGAGTTATTGAGGATCAGTGTTTAGGTGATCAGAATAAATTTTTTGGGGGAGAAACTATCAACATTGTAGACATAGCTCTTGGGTCTTTTGCCAAGTTTATTGAGGTTTCGGAAGATATGTTTGAAGTGAAGGTCATAGAAGCTGAGAAATTTCCTCACTTGCACTTATGGTTTAATAATTTCAAGGAGGTTCCTGTCATCTCTGAAAACACCCCTGACCAGGAGAAATTGGTAGCTTTTATTAAGTCTCTTAGAGAAAAAATGTATGGATCTTCATAA 669 0.3886 MAEVKIHGFWYSPFTLRVVWTLKLKDIAYENIEEDRFNKSPQLLEYNPVHKKTPVLVHNGKPICESMIIVEYIDEIWPHNPLLPVDPYEKAVARFWVKYVDDMFSTVAAFFRSNVGEGRENAIRDIGERLRVIEDQCLGDQNKFFGGETINIVDIALGSFAKFIEVSEDMFEVKVIEAEKFPHLHLWFNNFKEVPVISENTPDQEKLVAFIKSLREKMYGSS. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07141 222 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Seca7g07141 222 PRINTS Omega-class glutathione S-transferase signature 144 163 IPR005442 GO:0004364|GO:0005737
Seca7g07141 222 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Seca7g07141 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Seca7g07141 222 CDD GST_N_Tau 4 77 - -
Seca7g07141 222 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Seca7g07141 222 Gene3D - 86 222 - -
Seca7g07141 222 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Seca7g07141 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 208 IPR045073 -
Seca7g07141 222 Gene3D Glutaredoxin 1 85 - -
Seca7g07141 222 SFLD Glutathione Transferase (cytosolic) 1 219 IPR040079 -
Seca7g07141 222 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Seca7g07141 222 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Seca7g07141 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Seca7g07141 222 Pfam Glutathione S-transferase, C-terminal domain 120 192 IPR004046 -
Seca7g07141 222 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Seca7g07141 222 FunFam Tau class glutathione S-transferase 83 221 - -
Seca7g07141 222 FunFam Glutathione S-transferase GSTU6 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07141 Seca-Chr7 174319876 174321067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07141 3 221 Glutathione S-transferase Gene Family AT2G29460 42.727 1.09e-57 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07141 K00799 - gmx:547584 337.421