Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07118 ATGAAGGAAAAGGTGGATTCCCCTATTACAGTGCTTGAGGACTATTTTAGGAGCTCAGATTCAGAATCAAGTTCTTCTAAAGAGCCTACAGTGGATTCTGAGTCTCAAGACATTTCAAAACCTGTTTCTAGATGGCATTCATTTCTTCAATTGTTGAGGAGCAGATCAAAGAAACAGATAGCCACATTGCATCCTCTCAATCTCTCCAAAAGAATGAGCAGTAGCATGAGGGAGTCCATACTACCAAGTTGTTTCACAGATGCAACTTTGTCCCCTTGCAGATCACCATGGAAGATCTTCACTCATCATGAAATACAACTTGCAACCAATTATTTTAGCCAAGAAAATTTGATTGGAAAAGGTGGTTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATCATGAGCTAGTAGCAATTAAAAGGCTAACAAGAGGAACAGCTGATGAAGTCATAGGGGATTTCTTATCAGAACTTGGTGTAATGGCACATGTAAACCATCCCAATACTGCTAAACTTGTTGGCTATGGTGTGGATGGGGGAATGTATCTAGTTCTTGAATTGTCTGAAAAAGGAAGCCTAGCTTCAGTGTTTTATGGTTCCAATGAGAAACTACCATGGTGTATTAGGCACAAAATTGCATTAGGAACAGCTAAGGGTTTATTATATCTTCATGAAGGTTGTCAAAGAAGAATCATCCATAGAGATATAAAAGCTGCCAATATATTGCTCACGGAGGACTATGAGCCTCAGATTTGTGACTTTGGGCTAGCAAAATGGCTGCCAGAGAATTGGACACACCACACAGTTGCAAAATTTGAAGGAACTTTTGGCTACCTAGCTCCTGAATACTTGCTTCATGGCATAGTAGATGAGAAAACAGACGTATTTGCCTTTGGGGTACTGTTATTAGAATTAGTCAGTGGGCGTAGAGCACTTGATTATTCACAGCAAAGCCTTGTTTTGTGGGCAAAACCATTGCTAAAAAAGAATGATATTAGGGAGCTTATTGATCCTTCATTAGTTGGTGACTATGACTCTAGGCAGATGAATCTCATGCTCTTGGCAGCTTCTTTATGCATACAACAGTCCTCAATTCGTCGACCCTCTATAAGACAGGTTACCTGGGCTGGTTTTGATAGACTAGAGATTGATCAATTTATCTTTAAACCCGTTCTTTTACTTGGTTATTTGAACGGATTTCAAGTACTTGATGTGGAAGATGCCTCTAGCTTTAGTGAGCTGGTCTCAAAGCGTGACGGGCCAGTTTCTTTCTTACAGGTGCAGCCTTTCCCTGTAGGCTCTCATGGCCAGGCCCAGGAGGGATTCAGAAAATCACATCCTTTACTGCTGGTTGTTGCTGGGGATGACACTGTCCAAAATGATAAGGTGGAGACTCAATCTGGGAATGGTCTTAACTCTGCTACTGCTGTTCGGTTTTACTCTTTAAAGTCTCATTGTTATGTTCATGTTCTGAGATTTCGATCCATGGTGTGTATGATCAGATGCAGTTCCAAGATAGTTGCTGTTGGTCTTGCCACACAAATATACTGCTTTGATGCATTGACTCTTGAGAATAAATTCAGTGTTCTCACTTATCCTGTTCCTCAGTTAACGGGACAAGGATCCATAGGTGTTAATGTGGGTTATGGTCCAATGGCTGTGGGTCCAAGGTGGCTAGCTTATGCTTCCAACAGCCCACTGCCCTCAAATGTAGGATGCATAAGCCCACAGAACCTAAGTCCCTCTCCAGGAATTAGTCCATCAACATCTCCAGGCAGTGGTAGTTTGGTGGCTCGCTATGCAATGGAGTCCGGTAAACATTTGGCTGCTGGAATAATCAGATACTGTCAAGAGCTGCTTCCTGATGGTTCTAATTCTCCAGTACCATCAAATTCAGGCTGGAAAGTTGGTAGGGTTACAGGAAATGATATGGATAGTGCAGGAATGGTGATTGTTAAGGATTTTGTTTCCAGAGCTATCATCTCACAATTTAAAGCTCACTCTAGTCCTATATCTGCTCTGTGTTTTGACCCCAGTGGAACCCTTCTGGTCACTGCATCAATCTATGGAAATAATATTAATATCTTCCGGATAATGCCATTGTGTGAAAGCAAGGGTTCAGGGGTTCCAGGCTGTGACTGGAGCTCTTCTCATGTGCATCTTTATAGACTTCATCGTGGAATAACACCAGCTATGATCCAAGACATTTGTTTTAGTCATTTCAGCCAGTGGATTGCAATTGTCTCATCCAAGGGGACTTGTCATCTTTTTGTTTTGTCACCTTTTGGCGGTGATACTGGTTTCCAAATTATCAGTTCTCAGGATGAAGAACCCTCATTACTTCCAGTTTTGTCTCTACCTTGGTGGTCTACTTCATCTTCTATTTCTAATCAGCAATATTCGCCTCCTCCAGCACCTACTGTCCTTTCTGTGGTTAGCCGGATAAAGTATAGCAGTTTTGGATGGCTTAATACCATTCATAATTCTACTGCAAATGTGACAGGAAAAGTTTTTGTGCCATCTGGTGCTATTGCTGCGATTTTTCATAATTCCTTATCTCACTCACAGGAGCCTGTTAACACAAAAATGAAATCCTTGGAGCATCTGTTAGTATATACACCATCAGGTCATTTAGTTCAACATGAGCTTCTGCCATCTGTTGGTCCAGAACCAAATGAAAGTGGTTTGAGAAACCAGTCAGCTTCAGCCCTGCATATGCAGGAGGATGAGTTCCGAGTGAAAGTTGAGCCTATTCAATGGTGGGACGTATGTAGAAGGTCAGAATGTCCAGAAAGAGGAGATCCTTCCTGCAATACCTTTGATAGACAAGATGGCGTTGATAGAGTTCAAGAGAAAATATATTCTGGTGATGGCTATGGATTGAATTTTATAAGTAAAAGTGATGGTGTTGGGAAAAAGACAGAGAAATCTTCTACAAGGAAGCCTCAAGATAAATTTCACTGGTATCTATCTAATGCGGAGGTACAAGTGAATTTTGGAAGGATGCCAATATGGCAAGAGTCTAAGATTTGTTTCTGCTCAATGAATTCAGTGAGAACTTTTTTCAGTGGTGGTGGAGAGTCTGAAATTGAAAAGATATCTGCTAATGAAGTTGAGATAAGACGGAAGGAGTTGCCTGTTTTTGACCATTTTCATAGCATCAGACCAAGCTGGAATGAGAGAAACCTTCCTGGGGGAAAACATTTGGGCCCTGCTTCTCCAGTTCCCTATCAGGCTGAAGACAAGCAAACTGCTGACGTGACAGTTATTTGCCACTCAAAGCCAGCATCACTGAGCTCCACTGAAAGCTCTGATGGAGCTCCTGTGATGACCTACCCATCAATTTAA 3348 0.417 MKEKVDSPITVLEDYFRSSDSESSSSKEPTVDSESQDISKPVSRWHSFLQLLRSRSKKQIATLHPLNLSKRMSSSMRESILPSCFTDATLSPCRSPWKIFTHHEIQLATNYFSQENLIGKGGYAEVYKGCLPNHELVAIKRLTRGTADEVIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMYLVLELSEKGSLASVFYGSNEKLPWCIRHKIALGTAKGLLYLHEGCQRRIIHRDIKAANILLTEDYEPQICDFGLAKWLPENWTHHTVAKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLKKNDIRELIDPSLVGDYDSRQMNLMLLAASLCIQQSSIRRPSIRQVTWAGFDRLEIDQFIFKPVLLLGYLNGFQVLDVEDASSFSELVSKRDGPVSFLQVQPFPVGSHGQAQEGFRKSHPLLLVVAGDDTVQNDKVETQSGNGLNSATAVRFYSLKSHCYVHVLRFRSMVCMIRCSSKIVAVGLATQIYCFDALTLENKFSVLTYPVPQLTGQGSIGVNVGYGPMAVGPRWLAYASNSPLPSNVGCISPQNLSPSPGISPSTSPGSGSLVARYAMESGKHLAAGIIRYCQELLPDGSNSPVPSNSGWKVGRVTGNDMDSAGMVIVKDFVSRAIISQFKAHSSPISALCFDPSGTLLVTASIYGNNINIFRIMPLCESKGSGVPGCDWSSSHVHLYRLHRGITPAMIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGDTGFQIISSQDEEPSLLPVLSLPWWSTSSSISNQQYSPPPAPTVLSVVSRIKYSSFGWLNTIHNSTANVTGKVFVPSGAIAAIFHNSLSHSQEPVNTKMKSLEHLLVYTPSGHLVQHELLPSVGPEPNESGLRNQSASALHMQEDEFRVKVEPIQWWDVCRRSECPERGDPSCNTFDRQDGVDRVQEKIYSGDGYGLNFISKSDGVGKKTEKSSTRKPQDKFHWYLSNAEVQVNFGRMPIWQESKICFCSMNSVRTFFSGGGESEIEKISANEVEIRRKELPVFDHFHSIRPSWNERNLPGGKHLGPASPVPYQAEDKQTADVTVICHSKPASLSSTESSDGAPVMTYPSI. 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07118 1115 MobiDBLite consensus disorder prediction 14 38 - -
Seca7g07118 1115 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 189 378 - -
Seca7g07118 1115 SUPERFAMILY WD40 repeat-like 477 757 IPR036322 GO:0005515
Seca7g07118 1115 MobiDBLite consensus disorder prediction 1 38 - -
Seca7g07118 1115 MobiDBLite consensus disorder prediction 1096 1115 - -
Seca7g07118 1115 Gene3D Phosphorylase Kinase; domain 1 88 186 - -
Seca7g07118 1115 Gene3D - 582 811 IPR015943 GO:0005515
Seca7g07118 1115 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 371 1107 IPR045142 GO:0006914
Seca7g07118 1115 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Seca7g07118 1115 Pfam WD domain, G-beta repeat 662 687 IPR001680 GO:0005515
Seca7g07118 1115 SMART serkin_6 112 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07118 1115 Gene3D Transferase(Phosphotransferase) domain 1 189 381 - -
Seca7g07118 1115 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 83 186 - -
Seca7g07118 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Seca7g07118 1115 SUPERFAMILY Protein kinase-like (PK-like) 89 375 IPR011009 -
Seca7g07118 1115 ProSiteProfiles Protein kinase domain profile. 112 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07118 1115 SMART WD40_4 715 758 IPR001680 GO:0005515
Seca7g07118 1115 SMART WD40_4 657 697 IPR001680 GO:0005515
Seca7g07118 1115 Pfam Protein kinase domain 113 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07118 1115 Pfam Breast carcinoma amplified sequence 3 804 1045 IPR022175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07118 Seca-Chr7 174061307 174074656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07118 99 389 Trihelix Transcription Factor Family AT1G68690 40.397 3.79e-62 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Seca7g07118 BCAS3 1.6e-73 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07118 - - psat:127092010 1152.89