Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07111 ATGGGGTCGAAGCCGTGGCTGTACCCCGCTTCCAACTATCGAGCTCTAGAAAGCTACTGGGATACCGACGAAGACGCGCCTGGTCCTCGTTGTGCCCACACGCTCACCGCCGTCGCCGCCACCAAGACCCGTGGTCCACGCTTAATCCTCTTCGGCGGTGCCACTGCCATTGAAGGAGGATCTTCCTCAGCTCCTGGCATTCGATTAGCGGGAGTCACGAATTCCGTCCATTCATATGACGTTCAAACAAAAAAATGGACTAGAATTAAGCCTGCCGGAGAGCCGCCCTCTCCTCGGGCTGCCCATGCTGCTGCTGCAGTTGGCACCATGGTCGTTTTTCAGGGTGGGATAGGTCCTGCTGGACATTCTACTGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGAGTCGTTGTACAAGGGCAAGGACCCGGGCCTCGCTACGGCCATGCAATGGACTTGGTTGCTCAGAGATATCTTGTTACTGTCAGTGGAAATGATGGGAAACGTGTTGTATCTGAGGCTTGGGCTTTGGATACTGCTCAAAAACCTTATGTGTGGCAGAGGCTGAACCCAGAAGGTGATAGACCTTCTGCTAGAATGTACGCGACTGCTAGTGCCCGCTCAGATGGAATGTTTTTACTCTGTGGTGGAAGAGACTCTTCTGGAGCTCCGCTTGCAGATGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCACCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTCTTTGTTGGTGCACGGTTACATGTTACAGGAGGTGTTCTCAGGGGTGGACGGGCTGTGGAAGGTGAAGCATCCATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGACAGAAATGGCATCGTCTCCTCCTCACGCTCAAATAGAAGTCATGATTATGACCCTTCTTTGGAGCTTATGCGTCGTTGTCGCCATGCAGCAGCGGCTGTTGGTGTTCAAATTTATATCTATGGTGGTCTTAGAGGAGATACACTACTAGATGATTTCTTAGTGGCTGAAAATTCACCAATTCAGCCTGACGCTAATTCTCCTATGTTAACTGCTGAAAGAGCTTCGCCTGTTACAAGTCCCAAACAGAATCAGTCTAACTTCAATTATAATGTAACAACACCAAGTTTGGATGGTGGACCAGGCATTCCCTCGTCTGGTGGCTCAGGCATGGACAAAAATTCAATGGAGAAACTGAGGGAGGCATCAGCTGCTGAAGCTGAGGTAGCGAGTGCTGTCTGGCAAGCTGTGCAGGCTATATCAAGTAGTCCTGCTGAAGAAACATCTGTATCAGATGACAACTCACAAGCTGCAGAAACAGTTTCAGATGGAAGTGACACAGAGGGAGATGTTCGCCTTCATCCTAGAGCTGTTGTAGTTGCTAAAGAGGCTGTAGGTAATCTAAGTGGAATGGTGAGACAATTGTCGCTGGATCAATTTGAAAATGAAAGCAGACGCATGGTTCCCATGAATAATGATTTGCCATATCCTACAAAAAAATTCACTAGGCAGAAATCCCCTCAGGGTTTGCATAAAAAGGCAAGCATTTTTTCATGCACATTCTTCTTACCTTATATTATAATTTCAACTTTGCTTAGGCCTCGCAACTGGAAAGCTCCTGCAAACAGGCGATTCTTCTTGGATTCTTATGAAGTGGGAGAGCTTTGCTATGCTGCTGAGCAAATATTTATGCATGAACCAACTGTTCTTCAGCTAAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGCCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCATCAACTGCAGGAGACATCACGTATATTGACTACCTGTTTTTGGGAGATTATGTTGATCGAGGACAGCACAGCTTGGAAACCATTACCTTGCTACTTGCTCTTAAGGCAGGCTACTGTTTAATCGAATATCCTGAGAATGTTCACTTGATACGTGGAAACCATGAAGCTGCTGACATAAATGCACTGTTTGGTTTTCGTATAGAGTGCATTGAAAGAATGGGAGAAAATGATGGAATATGGGCATGGACACGATTCAATCAACTTTTTAACTATCTTCCACTAGCTGCTCTTATTGAAAAGAAAATTATCTGTATGCATGGTGGCATTGGAAGGTCTATCCATTCAGTAGAACAGATAGAGAAGCTTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTTTTATGGTCTGATCCCACAGAAAATGATAGTGTAGAGGGTTTGAGACCAAACGCTAGAGGGCCAGGGCTTGTCACTTTTGGGCCTGATCGTGTCACGGACTTCTGTAAGAAAAATAAGTTACAGCTCATTATAAGGGCCCATGAATGTGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAATTAATCACACTTTTTTCTGCAACTAACTATTGTGGAACTGCAAACAATGCGGGAGCTATACTAGTAGTTGGTAGGGGTTTGGTTGTGGTTCCGAAATTAATTCATCCCATACCACCTCCCCTTCAGTCACCCGAGACATCTCCTGAGCGTGTCATGGATGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTCGGGGCCGACCACAGCCTGACCTTGACCGTGGCTCACTAGCATATATATAA 2712 0.4635 MGSKPWLYPASNYRALESYWDTDEDAPGPRCAHTLTAVAATKTRGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDVQTKKWTRIKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHAMDLVAQRYLVTVSGNDGKRVVSEAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAVEGEASIAVLDTAAGVWLDRNGIVSSSRSNRSHDYDPSLELMRRCRHAAAAVGVQIYIYGGLRGDTLLDDFLVAENSPIQPDANSPMLTAERASPVTSPKQNQSNFNYNVTTPSLDGGPGIPSSGGSGMDKNSMEKLREASAAEAEVASAVWQAVQAISSSPAEETSVSDDNSQAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLSGMVRQLSLDQFENESRRMVPMNNDLPYPTKKFTRQKSPQGLHKKASIFSCTFFLPYIIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKAGYCLIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTDFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI. 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07111 903 MobiDBLite consensus disorder prediction 361 418 - -
Seca7g07111 903 Gene3D - 6 194 IPR015915 GO:0005515
Seca7g07111 903 SUPERFAMILY Metallo-dependent phosphatases 548 864 IPR029052 -
Seca7g07111 903 ProSitePatterns Serine/threonine specific protein phosphatases signature. 669 674 IPR006186 GO:0016787
Seca7g07111 903 Pfam Calcineurin-like phosphoesterase 595 807 IPR004843 GO:0016787
Seca7g07111 903 Pfam Galactose oxidase, central domain 115 157 - -
Seca7g07111 903 Pfam Galactose oxidase, central domain 45 106 - -
Seca7g07111 903 FunFam Serine/threonine-protein phosphatase 195 363 - -
Seca7g07111 903 SUPERFAMILY Kelch motif 70 356 IPR015915 GO:0005515
Seca7g07111 903 MobiDBLite consensus disorder prediction 372 400 - -
Seca7g07111 903 Gene3D - 550 875 IPR029052 -
Seca7g07111 903 MobiDBLite consensus disorder prediction 878 903 - -
Seca7g07111 903 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 8 903 - -
Seca7g07111 903 FunFam Serine/threonine-protein phosphatase 519 876 - -
Seca7g07111 903 MobiDBLite consensus disorder prediction 443 463 - -
Seca7g07111 903 PIRSF STPPP_BSU1 1 903 IPR012391 GO:0004721|GO:0009742
Seca7g07111 903 MobiDBLite consensus disorder prediction 443 472 - -
Seca7g07111 903 SMART pp2a_7 567 856 IPR006186 GO:0016787
Seca7g07111 903 FunFam Serine/threonine-protein phosphatase 9 192 - -
Seca7g07111 903 Gene3D - 195 364 IPR015915 GO:0005515
Seca7g07111 903 PRINTS Serine/threonine phosphatase family signature 796 816 IPR006186 GO:0016787
Seca7g07111 903 PRINTS Serine/threonine phosphatase family signature 595 622 IPR006186 GO:0016787
Seca7g07111 903 PRINTS Serine/threonine phosphatase family signature 630 657 IPR006186 GO:0016787
Seca7g07111 903 PRINTS Serine/threonine phosphatase family signature 818 834 IPR006186 GO:0016787
Seca7g07111 903 PRINTS Serine/threonine phosphatase family signature 668 692 IPR006186 GO:0016787
Seca7g07111 903 PRINTS Serine/threonine phosphatase family signature 706 732 IPR006186 GO:0016787
Seca7g07111 903 PRINTS Serine/threonine phosphatase family signature 736 763 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07111 Seca-Chr7 173944537 173958608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07111 596 799 Calmodulin-binding Proteins AT5G63870 32.340 8.37e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07111 K01090 - gmx:100805538 1653.65