Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07094 ATGGGTTTCAATTCTAACTCTAGCTCTACTGTGGTGATGAGGTTATCATTGTCCGAAGAAAATTCCCCTGTGCATGCCCTTACTCTGTTTGTGCTTCTTCTTTGTGCTTGTATTATCATTGGTCATCTTCTCGATAAGAGTCGATGGATGACTGAGTCAGTCATTGCCCTCATCATTGGCCTTGTTGCTGGAAACTTTATTATATTCGCAACTGGGTTGGGCCATTCACGCATCTTAGTATTCGATGAACAGCTTTTCTTTGCGTATCTTCTTCCACCCATCATTTTTAATGCAGGGTTCCAGGTGAAAAAGAAGCGATTTTTTCGAAACTTCTTGGCAATTATTTCATATGGTGTTCTTGGGACGCTAATAATGTTTCTCATTGTCTCACTGGGTTCATCCCTATTTTTCAAAAAATTGGAAATTTCACTGGACATGGGTGACTATTTAGCACTTGGTGCAGTGTTTTCAGCTACAGATTCTATTTGCACATTACAGGCGCTTAATCAGGAAGAGACGCCTCTTCTATACAGCATAGTTTTTGGTGAAAATGTGGTCAATGATGCCACATCTGTTCTTCTTTTTAATGCAATCCAGAAACTTGACCTCTCAAACATCACCTCAACCAATGTTAGACAGCTTGTTGGAAATTTTTTTGACTTATTTGTGACAAGCACATTGATGGGAGTAGTTGTTGGCTTGTTTAGTGCTTACATGACAAAGAAGTTGTGTTTTGGCAGGCATTCCACTGATCGAGAAGTTGCTCTTATGATCCTAATCGCCTACTTTTCTTATATCTTCGCTGAACTTCTGGGTTTAAGTGGGATCCTTACGGTGTTCTTCTGTGGGATTCTCATGTCCCATTACACCTGGCATAATGTCGCAGAGAACTCTAAAATCACAAGCAGGCATGTTTTTGCAACATTATCTTTTATCGTGGAGAGTTTCATCTTCTTGTATGTTGGTGTGGATGCATTGAATAGGGACAACTGGACCTTTGCCAGCAACAGTCCATGGACAGTGATTTGGGCATCTGCAATACTGCTTCTCTTGGTTCTGCTTGGAAGGGCAGCTTTTGTGTTCCCCCTATCATTTATAGGCAATTTTTTCCGAAAGTCTGAGACTGACAAGATTGGTCTTAAGCAGCAGTTTGTAATATGGTGGGCTGGGCTCATGCGAGGTGCTGTATCCATTGCACTTGCATATAAGAAGTTTACTATATTAGGGCGTACTAGACTGCCAGGGAATGCTATGATGATCAGCAGCACCATTACAGTTGTTATCTTAACTAATGTGGTGGGTGGATTAGTGACTAAGCCTCTAATAAGGTTGTTGTTGGGTAGGACTACTACTCTGTCTCCTGCTGCAGGGTCGAATGGGCAGCAACATATTTCAGAATCCAATAGACAAACGATCCATCATTATTGGCGAATGTTTGATGATACTTTCATGCGCCCTGTTTTTGGTGGCAGGGGATTTCTACCACCTCTTATTCCTGCAGCTGCTTCACCAGGAGAGGGCACTAGCAAAACCCAAAATTAA 1542 0.4176 MGFNSNSSSTVVMRLSLSEENSPVHALTLFVLLLCACIIIGHLLDKSRWMTESVIALIIGLVAGNFIIFATGLGHSRILVFDEQLFFAYLLPPIIFNAGFQVKKKRFFRNFLAIISYGVLGTLIMFLIVSLGSSLFFKKLEISLDMGDYLALGAVFSATDSICTLQALNQEETPLLYSIVFGENVVNDATSVLLFNAIQKLDLSNITSTNVRQLVGNFFDLFVTSTLMGVVVGLFSAYMTKKLCFGRHSTDREVALMILIAYFSYIFAELLGLSGILTVFFCGILMSHYTWHNVAENSKITSRHVFATLSFIVESFIFLYVGVDALNRDNWTFASNSPWTVIWASAILLLLVLLGRAAFVFPLSFIGNFFRKSETDKIGLKQQFVIWWAGLMRGAVSIALAYKKFTILGRTRLPGNAMMISSTITVVILTNVVGGLVTKPLIRLLLGRTTTLSPAAGSNGQQHISESNRQTIHHYWRMFDDTFMRPVFGGRGFLPPLIPAAASPGEGTSKTQN. 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07094 513 NCBIfam sodium/hydrogen exchanger 3 25 448 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g07094 513 Gene3D - 23 449 IPR038770 -
Seca7g07094 513 PRINTS Na+/H+ exchanger signature 85 96 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g07094 513 PRINTS Na+/H+ exchanger signature 114 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g07094 513 PRINTS Na+/H+ exchanger signature 99 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g07094 513 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g07094 513 Pfam Sodium/hydrogen exchanger family 31 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca7g07094 513 PANTHER SODIUM/HYDROGEN EXCHANGER 16 488 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07094 Seca-Chr7 173833037 173846951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07094 18 509 Antiporters AT3G05030 57.386 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07094 - K14724 qsu:112020558 614.764