Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07093 ATGGGTTTCAATTCCAGTTCTAATGCGGTGATGAGGTTAGGGTTATCTTCATCCCATGAAAATCCCTCTGTGTATGCCATTACTCTATTTGTGGTTCTTCTTTGTGCTTGTATCATCATTGGCCACCTTCTCGAAAAGAGTCGATGGATGACTGAATCAGTCATTGCCCTCATCATTGGCCTTGTTGCCGGAAACATAATTCTATTCGCGACTGGGAGGAGGCGTTCACACGTTTTAGTATTCAATGAAAAACTTTTCTTTGTGTATCTTCTTCCACCCATCATATTTAATGCCGGGTTCCAGGTGAAAAAGAAGCAATTTTTTCGGAACTTTTTGGCTATAATTTTGTATGGTGTTGTTGGGACCCTAATGTCGTTTCTCGTTGTATCACTGGGTTCGTTCCTGTTGTTCAAAAAATTGGGCATTGATTCACTGGACTTGGGTGACTATTTAGCACTTGGTGCAGCATTTTCAGCTACAGGTTCTGTCTGCACATTACAGGCGCTTAATAAGGAAGAGACACCTCTTCTGTACAGTTTAGTTTTTGGTGAAGATGTGGTCAATGATGCCACATCTGTGGTTCTTTTTCATGTAATCCAAGGATTTGATCTCGCAAACATCACCTGGGCCAATGCCAGGCAGCTTGTGGAAAATTTTTTTGGTTTATTCGTGACAAGCACTTTGCTGGGAGTAGCTGTTGGCTTGCTTAGTGCTTACATTATAAAGAAGTTCTATTTTGGCAGGCATTCTACTGATCGAGAAGTTGCTCTTATGATCCTGTTGGCTTACTTTTCTTACATATTTGCTGAAATTATCGATTTAAGTGGGATCCTTACCGTGTTCTTCTGTGGGATTCTCATGTCCCATTACACCTGGCATAATACCGCAAAAAATTCTAGAATCACAAGTAGGCATACTTTTGCAACAATTTCTTTTATCGTCGAGAGTTTCATCTTCTTGTATGTTGGTGTGCATGCATTGGATACAGACAACATGATATTTGTCAGCAACAGTTCATCAACATTACTTGGGACATCTGCAATACTGCTTTGCTTGGTTCTGCTTGGAAGGGCAGCTTTTGTGTTCCCCCTATCATTTGTTGCCAATTTTTTCCGCAAGTCTGAGAATGACAAGATTGGTTTTAAGCAGCAGTTTGTAATATGGTGGGCTGGGATTATGCGAGGTGCTGTATCCATTGCACTTGTATTTAAGAAGTTTAGTATGTCAGGACATTCTCGACTGGAAGGGGATGCTATCATGATCACCAGCACCATAACAGTGGTTCTCTTAACTAATGTGGTAAGAATTCTTTGTTTAACTAGCACTTGA 1329 0.4071 MGFNSSSNAVMRLGLSSSHENPSVYAITLFVVLLCACIIIGHLLEKSRWMTESVIALIIGLVAGNIILFATGRRRSHVLVFNEKLFFVYLLPPIIFNAGFQVKKKQFFRNFLAIILYGVVGTLMSFLVVSLGSFLLFKKLGIDSLDLGDYLALGAAFSATGSVCTLQALNKEETPLLYSLVFGEDVVNDATSVVLFHVIQGFDLANITWANARQLVENFFGLFVTSTLLGVAVGLLSAYIIKKFYFGRHSTDREVALMILLAYFSYIFAEIIDLSGILTVFFCGILMSHYTWHNTAKNSRITSRHTFATISFIVESFIFLYVGVHALDTDNMIFVSNSSSTLLGTSAILLCLVLLGRAAFVFPLSFVANFFRKSENDKIGFKQQFVIWWAGIMRGAVSIALVFKKFSMSGHSRLEGDAIMITSTITVVLLTNVVRILCLTST. 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07093 442 Pfam Sodium/hydrogen exchanger family 31 433 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca7g07093 442 PANTHER SODIUM/HYDROGEN EXCHANGER 17 434 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Seca7g07093 442 Gene3D - 23 440 IPR038770 -
Seca7g07093 442 PRINTS Na+/H+ exchanger signature 85 96 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g07093 442 PRINTS Na+/H+ exchanger signature 99 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g07093 442 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g07093 442 PRINTS Na+/H+ exchanger signature 114 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07093 Seca-Chr7 173815652 173825517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07093 17 434 Antiporters AT3G05030 64.115 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07093 - K14724 vvi:100261462 575.859