Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07084 ATGGAGCACAATGAATGTCAGGCATTTGAAATTGATGAGCCTAAAGATATTTTTTTGGGTCAAGTTGTGTATAGCAAAGATGAAGCTTATAACTTATACCAAGAACATGCATTCAAAATGGGTTTTAGTGTAAGAAGAGGGAGGGCGTTGTACTATGATAGTGAGAAAAAGAATATACGTTTGAAAGACTATTATTGTTCCAAACAGGGGTTTAAGAATAATGAACCTCAAGGTGAAGTGACTTATGAAAGAGCAGATTCAAGAACAAATTGCCAAGCTATGGTGAGATTTAATGTGAGTAAGGAAGGATTATGGAAAATTACAAAGCTGGAATTAAATCACAACCATGACTTTGTGCCACCTGAGCAAAGGCATTTGTTGCGTTCTATGAGAAATATGTCAAATGCCAAAGGAGACCTCATAAAATCCATGGTGAATGCCGGTATGAGAGTTACTAATATTTGGAGTTATTTAGGAGAAGAGGTTGGTGGGTGTGATAACCTCGGTATAACAATGAAAGATATGCATAATTATGTTTACTCTGAAAAGATGAAATTAATTGATGCTGGTGATGCCCAGGCTTTAGTGAACCACTTACAAAGTAGACAAGCACAAGATGCAATGTTCTACTATAGTGTTCAGTTAGACCAGGAATCACGTTTGGCTAATGTATTTTGGAGAGATGGTTGTGACTCAGAAGAAGAATTTCAAAGCACTTGGGATGAGATGATAACCGAGTACAAACTTCATGATCATCAATGGTTGAGCAATATGTATAAAATCCGTCACAAGTGGAGCACTGCTTTTAGCAAAGATATATTCTCTGCTGGTATCAAGTCCTCTCAAAGGAGTGAAAGTACAAATAGTGTTTTGAATGAGATTGCAGGAAAAACAACAAGTCTCACACAATTCATATTGGCATTTGAGAAGATGGTAAAAAAGTGGCGGCATTTAGAGGTTGAGAAGGAATTCAAAAATAAGCAAAGTGAGCCTCCTCGCATTATAAATATTAGTGAAACTCTGCGACAAGCATCTATGATATATACTCACAAGATCTTTAAATTGTTCTTGAATGAATATCTTGATGGCACGGGTGGAAGCACTTCTATGCAGATTGGTGGGTGTGATAATGTGTCATATCATGAAGTAATTTTGAACAACATGCCTAATAAGAAATATATGGTAACATTTGACTCTTCCACTATTATGATTAATTGTAGCTGCCGCAAATTTGATTCCATGGGTATTCTTTGTAGTCATTCTTTGAGAATTTACAACATTAAAGGTATTCTAAAAATACCTGATCAATACTTCTTAAAAAGATGGTCAAAAGAGGCAAGGTCCATGATTTATGAGCATACAAAAGAAGATTCTAGCTCCAGTAACATTAATTCAATGATCAATGGTGATGATGCTGATTTTGTTTATCGAAATGCTATTATGAAGTCATTTTATAATCTTGTTTTGGAAACTCAAGAACATAAAGAAGCTCAAGAAATTATGTGGAAATTGCTTGATATTGGAGTTGAGCGTGTGCGACAATGTGTTGGTAAGCTCAATTTAAATTCAAATTCAGAAACCATTGATATTGAGGACAATGAGTGTGCTGCAATTTTTAATCCCCCTCTTGCAAAGACTAAAGGGATGTCTAGTGCTCGGAAGAAGGGGCATTTTGAGAAAAGGAAACGATCAACCACAAAAGCAAAGAAAGGTAGGGATTGGACAGCTTTTTAG 1734 0.3581 MEHNECQAFEIDEPKDIFLGQVVYSKDEAYNLYQEHAFKMGFSVRRGRALYYDSEKKNIRLKDYYCSKQGFKNNEPQGEVTYERADSRTNCQAMVRFNVSKEGLWKITKLELNHNHDFVPPEQRHLLRSMRNMSNAKGDLIKSMVNAGMRVTNIWSYLGEEVGGCDNLGITMKDMHNYVYSEKMKLIDAGDAQALVNHLQSRQAQDAMFYYSVQLDQESRLANVFWRDGCDSEEEFQSTWDEMITEYKLHDHQWLSNMYKIRHKWSTAFSKDIFSAGIKSSQRSESTNSVLNEIAGKTTSLTQFILAFEKMVKKWRHLEVEKEFKNKQSEPPRIINISETLRQASMIYTHKIFKLFLNEYLDGTGGSTSMQIGGCDNVSYHEVILNNMPNKKYMVTFDSSTIMINCSCRKFDSMGILCSHSLRIYNIKGILKIPDQYFLKRWSKEARSMIYEHTKEDSSSSNINSMINGDDADFVYRNAIMKSFYNLVLETQEHKEAQEIMWKLLDIGVERVRQCVGKLNLNSNSETIDIEDNECAAIFNPPLAKTKGMSSARKKGHFEKRKRSTTKAKKGRDWTAF. 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07084 577 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 11 213 IPR031052 GO:0006355
Seca7g07084 577 ProSiteProfiles Zinc finger SWIM-type profile. 393 429 IPR007527 GO:0008270
Seca7g07084 577 SMART 26again6 404 431 IPR006564 GO:0008270
Seca7g07084 577 MobiDBLite consensus disorder prediction 546 577 - -
Seca7g07084 577 Pfam SWIM zinc finger 399 423 IPR007527 GO:0008270
Seca7g07084 577 MobiDBLite consensus disorder prediction 550 568 - -
Seca7g07084 577 Pfam FAR1 DNA-binding domain 32 119 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07084 Seca-Chr7 173612254 173614373 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g07084 FAR1 9e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07084 - - tpra:123905334 491.886