Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07076 ATGGCGCTCAAGCTTTATGGTCTGGCCATGTCCACAAACACCACCAGAGCCATGATCTGTCTCCATGAGAAAGAGGTGGATTTTGAGCTTGTTTCAGTCAATGTGTTCACTGCAGAACATAAGCAGCCTCCTTTTCTCTCCAAGAATCCCTTTGGTTTGGTTCCAGTACTAGAAGATGGTGATCTCACCCTCTTTGAGTCCAGAGCCATCACTGCATATGTAGCTGAGAAGTTCAAGGAAACAGGACCTGATCTGATTAGGCACAATGATGCAAAAGAAGCTGCATTGGTGAAGATGTGGACAGAGGTAGAGTCACACTACTATGAGCCAGCAGTGTCACCCATTATCTATGAATACTTTGTGGCACCTTTTCAAGGCCAAGAACCCAACAAGTCAGTGATTGACACTAATGTGGAGAAGCTGAAGAATGTGTTAGATGTGTATGAGGAGAAGCTGAGCAGCACCAAGTACCTTGCTGGGGACTTTTATAGCCTTGCGGATCTTTGCCATATCTCTGAAACTCACTATTTTATGCAGACTCCATGTGCTTCAATGATCAATGATCGTCCCCATGTTAAGGCTTGGTGGGAGGATATATCTTCCAGGCCTGCTTTTAAGAAAGTTGAGGGAGGTATGACTTTTGGTCAGAATCAGAAATGA 660 0.447 MALKLYGLAMSTNTTRAMICLHEKEVDFELVSVNVFTAEHKQPPFLSKNPFGLVPVLEDGDLTLFESRAITAYVAEKFKETGPDLIRHNDAKEAALVKMWTEVESHYYEPAVSPIIYEYFVAPFQGQEPNKSVIDTNVEKLKNVLDVYEEKLSSTKYLAGDFYSLADLCHISETHYFMQTPCASMINDRPHVKAWWEDISSRPAFKKVEGGMTFGQNQK. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07076 219 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Seca7g07076 219 SUPERFAMILY GST C-terminal domain-like 73 210 IPR036282 -
Seca7g07076 219 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 208 - -
Seca7g07076 219 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Seca7g07076 219 Pfam Glutathione S-transferase, C-terminal domain 116 203 IPR004046 -
Seca7g07076 219 SFLD Main (cytGST) 1 212 - -
Seca7g07076 219 FunFam Glutathione S-transferase F2 2 86 - -
Seca7g07076 219 CDD GST_N_Phi 2 77 - -
Seca7g07076 219 FunFam Glutathione S-transferase F2 88 209 - -
Seca7g07076 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Seca7g07076 219 Gene3D - 87 209 - -
Seca7g07076 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 219 IPR010987 -
Seca7g07076 219 Gene3D Glutaredoxin 1 86 - -
Seca7g07076 219 CDD GST_C_Phi 92 208 IPR034347 -
Seca7g07076 219 SFLD Main.5: Phi-like 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07076 Seca-Chr7 173478756 173480143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07076 1 215 Glutathione S-transferase Gene Family AT3G62760 59.535 3.06e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07076 K00799 - gmx:100815147 405.986