Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07066 ATGGGGAAAGCTCCTCTCTCAGTATTCCCAGGTTTGGAATTAATCTATTTGTTATTCCTGCTTCTCCAGAATCCTCACTTGTCCATGAGTGATCCTATCATTACTGTTGGTCAAGGTCGTCAGTGTAATTTGCCTCTTAAAGATCCCACTGTTGGTAATGTTTTGTGCAAGTTGAGCCACATAGAGCGTGGAGGTTCTTCAGTTGCCTTACTAGAAATTACAGGGGGTAAAGGTTCCGTTCAAGTTAATGGCAAGACTTACCGAAGGAATGCCCGTTTGATTTTAAGTGGAGGTGATGAGGTGGTCTTTGGTTCTTCTGGCAAACATGCTTATATCTTTCAGCAGCTCAAAAATAATAATATAACTACTTCCGGTGTACCTTCTGTGAGTATTTTAGAAGCCCAAAGTGCTCCAATAAATGGAATGCAAGTTGAAGCTAGATCTGGAGACCCTTCAGCTGTAGCTGGAGCATCAATATTGGCCTCTTTATCTAATCTTCATAAAGATCTATCTCTCCTTCCACCTCCTGCTAAAACTTGCAAGAATGTGCAACAAAATGCTGATATTTCATCACTCCCTTCTGGCCATGGTGATGATGTTCCAGACAATGAAATGAAGGATGGCACCAATAATGGTGAACCTGATGGATCCTTTTCTGCGGAGAAAACTGTTCTTGCATCCTCTACCACTGTTAATGAAAATCCTAGCCTTGATACCTTGGAAGTCGATGCCAATGTGGATGCAGATGGTGGGAAGATGACTGCTGCTACCTGCGAATTGAGGCCATTACTGCGCATGCTTGCTGGTTCATGTCCTGAATTTGATTTAAGTGGTAGCATTTCCAAGATATTGGAAGAGCGAAGGGAATTAAGAAAACTCCTTAAAGATGTTGATACCCCAACAATATTGGCATCGACCAGGCGACAAGCATTCAAGGAAAGTTTACAACAGAGAATTCTCAGTGCTGAGAATATTGATGTCTCATTTGAAAATTTCCCGTATTACCTAAGTGATACGACAAAGAATGTTTTGATTGCATCTACATATATTCATTTGAAGTGCAATGGCTTTGGAAAATATGCTTCAGACCTCCCGTCAGTGTCTCCACGGATATTGTTATCTGGTCCTGCAGGTTCGGATATATATCAGGAGACTTTGTCCAAGGCACTTGCAAAGCATTTTGGTGCCAGGCTATTAATTGTGGATTCTCTTTCTCTGCCTGGTGGAACACCATTGAAGGAAATTGATTCTGCTAAAGAAAGTTCAAGGTCTGAAAAGCCAGCTGTGCTGGGTAAGAGAAGTGCCCAGGCTGCTCCATTACATCATAAGAGGCCTGCTTCTAGTGTTGATGCTGAAATTATAGGTGGGTCTACATTAAGTTCTCAGGCTATGCTGAAGAAAGAGGTTTCTACTGCATCATCAAAAGGCACTACTCTTAAAACAGGTGATCGAGTAAAATTTGTTGGTAACTTTCCAACTCACATCTCATCACTACCGAATAATCCAAGGGGACCAAGCTATGGTTGTCGGGGCAAAGTTCTCCTTGCTTTTGAAGATAATGGGTCTTCAAAAATTGGGGTTAGATTTGATAAATCGATTCCAGATGGCAATGACCTTGGAGGCCTTTGTGAAGATGATCGTGGCTTCTTTTGTTCTGCAAATAGTTTACTACGGGTAGATGGTTCTGGAGGGGATGACCTTGACAAAGTTGCAATTAATGAAATCTTTGAGGTTGCCTCTAATCAAAGCAAAAGCGATGCACTAGTGTTGTTCATTAAAGATATAGAGAAGGCAATGGTTGGGAACTCAGAAGTCTTGAAAAGTAAATTTGAAAGCTTGCCCCAGAATGTTGTGGTAATTGGCTCTCATACCCAGCTGGACAGTCGTAAGGAGAAGACCCAACCTGGCGGTCTTCTGTTTACAAAGTTTGGGAGCAATCAGACAGCACTACTTGATCTTGCTTTCCCGGATAACTTTAGTAGACTACATGATAGGAGCAAAGAAACTTCCAAAGTAATGAAGCAGCTTAGTCGCCTCTTCCCAAACAAAGTGACAATACAGCTGCCTCAGGATGAGGCTTTACTTTCTGATTGGAAGCAGCAGTTAGAACGTGACATTGAAACTATGAAAGCTCAGTCCAACATTGTCAACATTCATTCAGTTCTCAACAAAATTGGATTGGATTGCCCTGATCTGGAGACTATTTGCATCAAAGATCAAACCCTAACTACTGAAAGTGTTGAGAAGATTATTGGCTGGGCTATAAGTTACCATTTTATGCATTCAACTGAAGCATCTACCAAAGAATCTAAGCTTGTGATATCTGCAGAAAGCATTAAATATGGGCTTAGCATTCTACAGGGCATTCAAAATGAGAGCAAGAATTTGAAAAAGTCTTTGAAGGATGTAGTTACTGAGAATGAATTTGAGAAAAAATTGCTTGCTGATGTTATTCCACCAACTGATATTGGGGTTACATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAAGGAATTGGTTATGCTTCCTCTTCAGAGGCCTGAATTGTTTGGCAAAGGACAACTGACTAAGCCTTGCAAGGGAATATTGCTTTTTGGGCCTCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCTGGAGCAAATTTCATTAACATTTCAATGTCCAGCATTACTTCTAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTCTCTCTAGCCAGCAAAATTGCTCCAAGTGTTATATTTGTTGATGAGGTTGATAGTATGCTAGGGCGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTTAATTGGGATGGTCTGCGTACAAAAGATAAAGAACGTGTACTTGTTCTTGGTGCTACTAACAGGCCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCGCGAAGATTGATGGTTAACTTGCCAGATGCTCCAAACAGAGAAAAAATTCTTAGAGTCATTTTAGCAAAAGAAGATTTGGCACCTGATGTTGATTTGGAAGCAATAGCAAATATGACTGATGGATATTCAGGGAGTGATCTAAAGAATCTGTGTGTCACAGCAGCTCACTGCCCAATAAGAGAGATCTTGGAGAAGGAAAAGAGGGAGAGAAGCTTAGCATTGGCTGAGAACAAACCTTTGCCCGGATTGTGTAGCAGTGTTGACATTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGTACAGGTGTGTGCAAGCGTTTCATCAGAGTCATCAAATATGAATGAGCTACTCCAATGGAATGACCTCTATGGAGAAGGTGGGTCGAGAAAAATGAGATCTTTGAGCTACTTCATGTAA 3393 0.4114 MGKAPLSVFPGLELIYLLFLLLQNPHLSMSDPIITVGQGRQCNLPLKDPTVGNVLCKLSHIERGGSSVALLEITGGKGSVQVNGKTYRRNARLILSGGDEVVFGSSGKHAYIFQQLKNNNITTSGVPSVSILEAQSAPINGMQVEARSGDPSAVAGASILASLSNLHKDLSLLPPPAKTCKNVQQNADISSLPSGHGDDVPDNEMKDGTNNGEPDGSFSAEKTVLASSTTVNENPSLDTLEVDANVDADGGKMTAATCELRPLLRMLAGSCPEFDLSGSISKILEERRELRKLLKDVDTPTILASTRRQAFKESLQQRILSAENIDVSFENFPYYLSDTTKNVLIASTYIHLKCNGFGKYASDLPSVSPRILLSGPAGSDIYQETLSKALAKHFGARLLIVDSLSLPGGTPLKEIDSAKESSRSEKPAVLGKRSAQAAPLHHKRPASSVDAEIIGGSTLSSQAMLKKEVSTASSKGTTLKTGDRVKFVGNFPTHISSLPNNPRGPSYGCRGKVLLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANSLLRVDGSGGDDLDKVAINEIFEVASNQSKSDALVLFIKDIEKAMVGNSEVLKSKFESLPQNVVVIGSHTQLDSRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETSKVMKQLSRLFPNKVTIQLPQDEALLSDWKQQLERDIETMKAQSNIVNIHSVLNKIGLDCPDLETICIKDQTLTTESVEKIIGWAISYHFMHSTEASTKESKLVISAESIKYGLSILQGIQNESKNLKKSLKDVVTENEFEKKLLADVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLGATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILRVILAKEDLAPDVDLEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKRERSLALAENKPLPGLCSSVDIRPLKMEDFRYAHVQVCASVSSESSNMNELLQWNDLYGEGGSRKMRSLSYFM. 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07066 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 825 1098 IPR027417 -
Seca7g07066 1130 Gene3D - 824 1103 IPR027417 -
Seca7g07066 1130 SMART AAA_5 862 999 IPR003593 GO:0016887
Seca7g07066 1130 CDD RecA-like_ATAD1 829 995 - -
Seca7g07066 1130 ProSitePatterns AAA-protein family signature. 969 988 IPR003960 GO:0005524|GO:0016887
Seca7g07066 1130 Pfam ATPase family associated with various cellular activities (AAA) 866 995 IPR003959 GO:0005524|GO:0016887
Seca7g07066 1130 SUPERFAMILY SMAD/FHA domain 25 107 IPR008984 GO:0005515
Seca7g07066 1130 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 824 1000 - -
Seca7g07066 1130 Pfam AAA+ lid domain 1019 1054 IPR041569 -
Seca7g07066 1130 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 309 1129 - -
Seca7g07066 1130 MobiDBLite consensus disorder prediction 188 219 - -
Seca7g07066 1130 Gene3D - 22 122 - -
Seca7g07066 1130 Gene3D - 998 1092 - -
Seca7g07066 1130 MobiDBLite consensus disorder prediction 412 447 - -
Seca7g07066 1130 Coils Coil 786 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07066 Seca-Chr7 173379912 173400785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07066 825 1069 Calmodulin-binding Proteins AT3G56690 39.286 4.29e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07066 - - gmx:100801477 1894.4