Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07065 ATGGTTGAAACCAGACGCAGTTCCTCTTCTTCCAAGCGCGCTCTTTCTTCTTCTCCGTCTCCTTCTCCTTCCAACAACAAAAGATCCAAGGTCTCTGAGGATGCCTCATCCACTCCCCTGCCCTCCCCGGCAATTGTGGCTCCTGTCAACGAATCTGGAGAGCCGCAGCTACGGCCCTCTGATCTGCCAGATACGGCGTCGTTGAAGGCTGTGGATGCAGACAAGACTCCTTCTGTGCCCCTTGAAGGCGAGGCTTTGGTGCCCCCTCAGTCTCCAGGTGAAACTGCGGAAAAATCAAAGGTGGTTGGTGCGGGGGCATCGCCTGGTCGGTTGAAGAAACGCCCCACGATAACGATTCCAAAGGTTATGTGGGGAAAGCTCCTTTCTCAGTTTTCTCAGAATCCTCACCAGTCCATGTGTGATCCTATCTACACTGTTGGTCATGGTCATCAATGTAATTTATGGCTTAAAGATCCCACCCTTAGTAATGTTTTGTGCAAGTTGAGCCACATAGAGCGTGGAGGTTCATCTGTTGCATTACTGGAAATCACAGGGGGTAAAGGTGCTGTTCAGGTTAATGGCAAGACATACCGAAAGAATGCTCGTCTGATTTTAAGTGGGGGTGATGAGGTTGTGTTCGGTTCTTCTGGCAAGCATGCTTATATATTTCAGCAGCTCACACATAATAATATTACTACTGCTGGTGTACCTCCTTCTCTGAGTATTTTAGAAGCCCAAAGTGCTCCAATAAATGGAATGCAAGTTGAAGCTAGATCTGGAGACTCGTCAGCTGTTGCTGGAGCTTCAATATTAGCCTCTCTATCTAATCTTCATAAAGATTTATCTCTCATTTCACCTCCTGCTAAAACTGCCAAGAATGTGCAACAGAACACTGATGTTTCATCACTACCATCTGGCCACAAGGATGATATTCCAGGCATTGAAATGAAAGATGCCACAAATAGCGATGAACTTGCAGGAGTTTTCTCTGCTGAGAAAACTGTTCTTGCATCCTCTACCAATGATAATGAAAATCCTAAGCTTGACGCTGTGGAAATCGATGCCAATGTGGATGCAGATGTTGGGAAGATGACTGCTGCTACCTGCGAATTGAGGCCATTACTGTGCATGCTTTCCGGCTCATGTCCTGAATTTGATTTGAGTGGTAGCATTTCCAAGATATTGGAAGAGCGAAGGGAATTAAGAGAACTCCTCAAAGATGTTGATACCCCAGCAATATTAGCATCTACCAGGCGACAAGCATTTAAGGACAGTTTACAACAGAAAATTCTCAATGCTGAGAATATTGATGTCTCATTTGAAAGTTTCCCATATTATCTAAGTGATACAACAAAGAATGTTTTGATTGCTTCTACGTATATTCATTTGAAGTGCAATGGCTTTGGAAAATATGTGTCAGACCTTCCATCAGTGTCCCCACGGATATTGTTATCTGGTCCTGCAGGTTCGGAAATATATCAGGAGACTTTGTCCAAGGCCCTTGCGAAGCATTTTGGTGCCAAGCTACTAATTGTGGATTCTCTTTCACTGCCTGGTGCAGCACCATCAAAGGAAATTGATTCCACTAAAGAAAGTTCAAGGCCTGAAAGACCATCCGTGTTTACTAAGAGAAGTACCCCAGCTACTACAGTACAATATAAGAAACCAACTTCTAGTGTTAATGCTGAAATTATTGGTGGATCCACATTAAGTTCTCAGACTATGCTGAAGCAAGAGGTTTCTACTGCATCATCAAAAGGCAATACTCTTAAAACAGGTGATCGAGTAAAATTTGTTGGTAACATTCCTTGTCCTGTCTCATCGCTACAAAATTATTCTCCAAGGGGACCTAGCTATGGCTCCCGGGGAAAAGTTCTCCTTGCTTTTGAAGATAACGGGTCTTCAAAAATTGGGGTTAGATTTGATAAATCAATTCCTGATGGCAATGATCTTGGAGGCCTTTGTGAAGATGATCGTGGATTCTTTTGTTCTGCAAATCATTTACTACTGGTAGATGGTTCTGGAGGGGATGACTTTGACAGAGTGGCAATTCATGAAATCTTTGAGATTGCCTCTAAGCTGAGTATAAGTGGAGCACTAGTGTTGTTCATTAAAGATATAGAGAAGGCAATGGTTGGGAACTCAGAAATTTTGAAAAGTAAATTTGAAAGCTTGCCTCAGAATGTTGTAGTAATTGGCTCACACATCCAGCTGGACAATCGTAAGGAGAAGACCCAACCTGGCAGCCTTCTGTTCACAAAGTTTGGGAGTAATCAGACAGCATTACTCGATCTTGCTTTCCCGGATAGCTTTAGTAGACTGCATGATAGGAACAAAGAAACCCCCAAAGTTATGAAGCAACTTAGTCGCCTTTTCCCAAACAGAGTGACAATACAGCTGCCTCAGGATGAGGCTTTACTTTCTGATTGGAAGCAGCAGTTAGAACGCGACATTGAAACTATGAAAGCTCATTCTAACATTGTCAGCATTCGCTCAGTTCTCAACAAAATTGGATTGGATTGCCCTGACCTTGAGACTATTTGCATCAAAGATCAAACCCTAACTACTGACAGTGTTGAGAAGATTATTGGCTGGGCTGTAAGTTACCATTTTATGCATTCAACTGAAGCTTCTACCAAAGAATCTAAGCTTGTGATATCTGCAGAAAGCATTAAGTATGGGTTTAACATTCTACAGGGCATTCAAAATGAGAACAAGAACTTGAAAAAATCACTAAAGGATGTGGTTACTGAGAATGAATTTGAGAAAAAACTGCTTGCTGATGTTATTCCACCAACTGATATTGGAGTCAAATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTAAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTTGGCAAAGGACAGCTGACAAAGCCTTGCAAGGGAATATTGCTTTTTGGGCCTCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCTGGAGCAAATTTTATTAACATTTCGATGTCCAGCATTACTTCAAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTTTCTCTGGCCAGCAAAATTGCCCCAAGCGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGGAGACGGGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTTAATTGGGATGGTCTGCGTACAAAAGATAGAGAGCGTGTACTTGTTCTTGCTGCTACAAACAGGCCATTTGATCTGGATGAGGCTGTTATTAGGAGGCTTCCGCGAAGATTGATGGTTAGTTTGCCAGATGCAACAAACAGAGAAAAAATTCTTAGAGTCATTTTAGCGAAAGAAGATTTAGCGCCTGATGTTGATTTGGATGCAATAGCAAATATGACTAATGGATATTCAGGAAGTGACCTAAAGAATCTGTGTGTCACTGCAGCTCACTGTCCAATAAGAGAGATCTTGGAGAAGGAAAAGAGGGAGAGAAGCTTGGCATTGGCTGAGAACAAACCTTTGCCTGCATTGTGTAGTGGTGCCGACATTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGGTGTGTGCAAGCGTGTCATCAGAGTCATCAAATATGAATGAGCTACTCCAATGGAATGACCTCTATGGAGAAGGTGGATCGAGAAAAATGAGATCTTTGAGCTACTTCATGTAA 3729 0.4245 MVETRRSSSSSKRALSSSPSPSPSNNKRSKVSEDASSTPLPSPAIVAPVNESGEPQLRPSDLPDTASLKAVDADKTPSVPLEGEALVPPQSPGETAEKSKVVGAGASPGRLKKRPTITIPKVMWGKLLSQFSQNPHQSMCDPIYTVGHGHQCNLWLKDPTLSNVLCKLSHIERGGSSVALLEITGGKGAVQVNGKTYRKNARLILSGGDEVVFGSSGKHAYIFQQLTHNNITTAGVPPSLSILEAQSAPINGMQVEARSGDSSAVAGASILASLSNLHKDLSLISPPAKTAKNVQQNTDVSSLPSGHKDDIPGIEMKDATNSDELAGVFSAEKTVLASSTNDNENPKLDAVEIDANVDADVGKMTAATCELRPLLCMLSGSCPEFDLSGSISKILEERRELRELLKDVDTPAILASTRRQAFKDSLQQKILNAENIDVSFESFPYYLSDTTKNVLIASTYIHLKCNGFGKYVSDLPSVSPRILLSGPAGSEIYQETLSKALAKHFGAKLLIVDSLSLPGAAPSKEIDSTKESSRPERPSVFTKRSTPATTVQYKKPTSSVNAEIIGGSTLSSQTMLKQEVSTASSKGNTLKTGDRVKFVGNIPCPVSSLQNYSPRGPSYGSRGKVLLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLLVDGSGGDDFDRVAIHEIFEIASKLSISGALVLFIKDIEKAMVGNSEILKSKFESLPQNVVVIGSHIQLDNRKEKTQPGSLLFTKFGSNQTALLDLAFPDSFSRLHDRNKETPKVMKQLSRLFPNRVTIQLPQDEALLSDWKQQLERDIETMKAHSNIVSIRSVLNKIGLDCPDLETICIKDQTLTTDSVEKIIGWAVSYHFMHSTEASTKESKLVISAESIKYGFNILQGIQNENKNLKKSLKDVVTENEFEKKLLADVIPPTDIGVKFDDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVSLPDATNREKILRVILAKEDLAPDVDLDAIANMTNGYSGSDLKNLCVTAAHCPIREILEKEKRERSLALAENKPLPALCSGADIRPLKMEDFRYAHEQVCASVSSESSNMNELLQWNDLYGEGGSRKMRSLSYFM. 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07065 1242 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 420 1241 - -
Seca7g07065 1242 MobiDBLite consensus disorder prediction 290 311 - -
Seca7g07065 1242 Pfam AAA+ lid domain 1131 1167 IPR041569 -
Seca7g07065 1242 Gene3D - 936 1215 IPR027417 -
Seca7g07065 1242 Coils Coil 898 918 - -
Seca7g07065 1242 MobiDBLite consensus disorder prediction 290 304 - -
Seca7g07065 1242 SMART AAA_5 974 1111 IPR003593 GO:0016887
Seca7g07065 1242 MobiDBLite consensus disorder prediction 1 39 - -
Seca7g07065 1242 CDD RecA-like_ATAD1 941 1107 - -
Seca7g07065 1242 Pfam ATPase family associated with various cellular activities (AAA) 978 1107 IPR003959 GO:0005524|GO:0016887
Seca7g07065 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 937 1216 IPR027417 -
Seca7g07065 1242 ProSitePatterns AAA-protein family signature. 1081 1100 IPR003960 GO:0005524|GO:0016887
Seca7g07065 1242 Gene3D - 1110 1204 - -
Seca7g07065 1242 CDD FHA 141 224 - -
Seca7g07065 1242 SUPERFAMILY SMAD/FHA domain 124 220 IPR008984 GO:0005515
Seca7g07065 1242 Gene3D - 123 233 - -
Seca7g07065 1242 MobiDBLite consensus disorder prediction 1 114 - -
Seca7g07065 1242 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 936 1112 - -
Seca7g07065 1242 MobiDBLite consensus disorder prediction 522 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07065 Seca-Chr7 173356688 173368874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07065 937 1181 Calmodulin-binding Proteins AT3G56690 40.476 1.71e-42 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07065 - - gmx:100801477 1997.63