Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07057 ATGGAGGACATCATGAACTATGCTAAGGTAAAGGATGGGAGTGTTAGATTACCTGTTGGGTACAGGTTTGATCCCACAGATGAGATTCTTTTTAATTTCTACCTCAAGAGGAAGGTCTATGCTCTGCCTCTTCCTGCTCAAGTCATCCAAGAATTTGATGTTTTCCAAACAGAGCCATGGAAACTCGCCGGAGGTTGGTGA 201 0.4378 MEDIMNYAKVKDGSVRLPVGYRFDPTDEILFNFYLKRKVYALPLPAQVIQEFDVFQTEPWKLAGGW. 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07057 66 PANTHER NAC TRANSCRIPTION FACTOR 56 17 63 - -
Seca7g07057 66 SUPERFAMILY NAC domain 6 64 IPR036093 GO:0003677|GO:0006355
Seca7g07057 66 Gene3D NAC domain 26 65 IPR036093 GO:0003677|GO:0006355
Seca7g07057 66 Pfam No apical meristem (NAM) protein 18 63 IPR003441 GO:0003677|GO:0006355
Seca7g07057 66 ProSiteProfiles NAC domain profile. 17 66 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07057 Seca-Chr7 173239966 173240166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07057 6 64 NAC Transcription Factor Family AT5G13180 57.627 2.22e-17 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Seca7g07057 NAM 7.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07057 - - lja:Lj6g3v0227250.1 87.0409