Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07050 ATGATCAGAATATCACACCTTACATTACTGCTTCCATTTATCTTTCTTTCATTCATAGTAAACACTAGCCAATTGGTGTTTGCAAAAGGGACAGACAATGTTAGAGATGCTTGCAGAGTAACTAGGTACCCTGACCTTTGTATGCGCTCGCTGGCGCCATTCTCTAACAGTGCTGGAACAAGTCCCAGCAAGTGGGCAAGGGCAGGAGTGTCAGTGACAATTGGCGAGGTTAAGAATGTTCAAGCATATCTGGCAAACTTGAAGAGACATGGGCATGTAAAAGGAAGAAACAGAGTTGCACTTTCAGATTGTGTTGAGACTTTTGCAGATGCCCTTGATGAGCTTCACAGGTCACTTGGTGTGCTCAGAAGGCTAAGCAGAAGCACGTTTGGTACCCAGATGGGGGACCTAAATACATGGATAAGTGCAGCACTCACAAATGAAGATACTTGCCTTGATGGGTTTCAAGGCAAAAAGGGAAGGAAAATCAAATTGCTGCAAAATCGGGTTCTGAAAGCTTATTATATAACCAGTAATGCTCTAGCTCTAGTCAACAAACTTGCCACTACAGGTCTAGGAAGCATATCTGATCCATAG 597 0.4338 MIRISHLTLLLPFIFLSFIVNTSQLVFAKGTDNVRDACRVTRYPDLCMRSLAPFSNSAGTSPSKWARAGVSVTIGEVKNVQAYLANLKRHGHVKGRNRVALSDCVETFADALDELHRSLGVLRRLSRSTFGTQMGDLNTWISAALTNEDTCLDGFQGKKGRKIKLLQNRVLKAYYITSNALALVNKLATTGLGSISDP. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07050 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 187 IPR035513 -
Seca7g07050 198 SMART PMEI_2 29 183 IPR006501 GO:0004857
Seca7g07050 198 NCBIfam pectinesterase inhibitor domain 6 187 IPR006501 GO:0004857
Seca7g07050 198 CDD PMEI-like_3 37 189 - -
Seca7g07050 198 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Seca7g07050 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 189 IPR035513 -
Seca7g07050 198 FunFam Pectinesterase inhibitor 3 29 188 - -
Seca7g07050 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07050 Seca-Chr7 173191202 173191798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07050 34 196 Carbohydrate Esterase AT3G14310 33.929 9.59e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07050 - - gmx:100791264 268.085