Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07042 ATGGTTGCCATTTCCAATATACTGGGGCATGAGGAATGTCAAAGCTACTTAATTTTTCGTGTAGAAACTGCTCTTGCGGCAAGTTTTCGGACAGTTTTGTATTTTCTTGGTCTTGCCTATTGTTTCCTTGGATTATCGGCTATAACGGCTCGCTTCTTCCGATCTATGGAAAACGTGGTCAAGCACACAAGTGAGGTAGTGGAGGTAGATCCTGTTACTAAAACAGAAATTATTAGACATGAAAAAGTTTGGAATTATACAATTGCGGATATTAGCCTGTTGGCCTTTGGAACTAGCTTTCCTCAGATATCATTAGCCACCATTGATGCTATACAAAATGTGGGGAAACTGTATGCTGGAGGTTTGGGACCTGGAACACTTGTTGGTTCTGCAGCATTTGACCTTTTCCCCATCCATGCTGTATGTGTAATAGTTCCAAAAGCAGGAGAACTGAAAAAGATTGCTGATCTAGGAGTATGGCTGGTGGAGTTGTTTTGGTCATTTTGGGCTTACATTTGGTTATACATAATTTTGGAGGTGTGGACTCCAAATGTGGTGACTCTATGGGAGGCCTTGTTGACAGTGCTGCAGTATGGATTACTGTTAACTCATGCTTATGCTCAAGACAAACGTTGGCCCTATATTTCCCTACCTATTGCAAGAGATGAGAGGCCAGAAGATTGGGTGCCAGAAGAGACTTCTTGTTCTAAAAAAAAGTCCCATGAGAAGATGGAGTGCTCTGAGATAATTCATGTTAATGAAGAAAATGGGGACCCTGTTGATATTTTTTCCATTCATTCACAAAACCCCACAGATAGATTGTACGTAAGAGTACCTCAAATAGATGATGCAGAAAATTCTGACAAAGCTATGGAAACAATGTTGGAGGATGCCAATTTGCTTACAATTTGGGGGCAGCAGTTTGTGGATGCACTGAGGTTGGAGAGCCAAGAATCTAAAAAAATGAACAATATCTATCGTCGCATAGCTCAAATTTTCTGGCAATTGCTGCTTTTACCATGGAGATTTCTGTTTGCTTTTGTTCCTCCATGCCATATTGCTCATGGATGGATCTCTTTCATTTGCTCTCTGCTTTTCATCAGTGGGATAGCTTACGTTGTTACTAAGATCACAGATCTTATAAGTTGTGTCACAGGAATTAATGCTTACGTCATAGCATTTACAGCACTAGCCAGTGGAACCTCATGGCCTGATTTAGTGGCGAGCAAGATTGCTGCTGAACGTCAAAAAACTGCAGACTCTGCTATTGCAAACATCACTTGCAGTAATTCAGTGAATATATATGTTGGCATTGGTGTTCCATGGCTTATTGATACGTTGTACAACTTCATAGCATATAGAGAACCTCTCCGAATCGAAAATGCAGGGGGACTAAGCTTTTCATTGATCGTTTTCTTCGCCACTTCTGTTGGGTGTATATCAGTTTTGGTTATTAGGCGTCTAGTTTTTGGTGCAGAGCTAGGAGGACCAAGGCTCTGGGCATGGATTACCTGTGCGTTCTTCATGTTGCTGTGGATTATTTTTGTTGTACTATCTTCACTCAAGGTTTCCGGATTCATTTAG 1584 0.411 MVAISNILGHEECQSYLIFRVETALAASFRTVLYFLGLAYCFLGLSAITARFFRSMENVVKHTSEVVEVDPVTKTEIIRHEKVWNYTIADISLLAFGTSFPQISLATIDAIQNVGKLYAGGLGPGTLVGSAAFDLFPIHAVCVIVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVLQYGLLLTHAYAQDKRWPYISLPIARDERPEDWVPEETSCSKKKSHEKMECSEIIHVNEENGDPVDIFSIHSQNPTDRLYVRVPQIDDAENSDKAMETMLEDANLLTIWGQQFVDALRLESQESKKMNNIYRRIAQIFWQLLLLPWRFLFAFVPPCHIAHGWISFICSLLFISGIAYVVTKITDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIENAGGLSFSLIVFFATSVGCISVLVIRRLVFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI. 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07042 527 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016020|GO:0055085
Seca7g07042 527 Pfam Sodium/calcium exchanger protein 356 519 IPR004837 GO:0016020|GO:0055085
Seca7g07042 527 Gene3D - 86 220 IPR044880 -
Seca7g07042 527 Gene3D - 298 521 IPR044880 -
Seca7g07042 527 PANTHER SODIUM/CALCIUM EXCHANGER 12 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07042 Seca-Chr7 173118654 173124720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07042 5 527 Antiporters AT2G47600 72.075 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07042 K03452 - gmx:100792839 923.309