Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07025 ATGGCTTCCATTTTACCTTCCGTCCTAACAATGTCGATGTTTCTCCTCCTCCTCCTACCCTCATTTTCCTCTCTAGCTTTCGCAGACGTCCCTCCCGCCACTCCTGTCTCTCCTAAAACCGTATGCAAATCCACCCCAGACCCATCCTATTGCAATTCTGTCCTCCCTCCTCAAAACGGCAACGTTTATGATTATGGCCGGTTCTCAGTCAGAAAGTCCATATCACAGGCGAGGGATTTCCTGAACTTAGTTAACAAATATCTCCAACGCCGTTCCACTCTCTCCACCGCTGCCATCCATGCACTAGAAGATTGCCAGACCCTTGGTGAGCTCAACTTAGATTTTCTTCTGAGTTCCTTCCAAACTGTTAACAAACAAACTAAGTTCCTAATCACTTTGCAAGCTGACGATATCCAAACCTTGCTTAGTGCCATTCTAACTAACCAACAAACCTGTCTGGAAGGCCTCCAAGCCACTGCTTCCGCTTGGAGCGTGAAAAACGGACTCTCTGTTCCACTTTCCAATGACACAAAGCTCTACAGTGTATCTCTCGCTCTCTTCACAAAAGGTTGGGTTCCCAACAACAAAACCAAAACCAACACCGCATTTCAGCCAACCATGACACAGCTAGGATTCCGAAATGGACGTTTGCCCCTTAAGATGTCAAGTAGAACTCGCGCGATCTACGAACGGGTGAGTCGAAGAAAGCTCCTTGGGGCTACTACAGTAGGTAATCATGAGGTTGTGGTGAGAGATATAGTGACGGTGAGCCAAGATGGAAGCGGAAACTTCACCACCATCAACGACGCCATCGCTGCGGCGCCAAACAAGACTTCCTCAACGGCCGGGTACTTCTTGATCTATGTCACTGCAGGTGTTTACGAGGAAAATGTGTCTATTGATAAGAAAAAGACGTACTTGATGATGGTTGGAGATGGCATCAACAAGACAATCATTACCGGCAATCGCAGTGTCGTTGATGGCTGGACAACCTTCAAGTCAGCAACCTTTGCGGTGGTTGGACGAGGATTTGTGGGTGTGAATATGACTATCCGTAACACAGCGGGGCCAGAGAAGCACCAAGCGGTTGCACTTCGAAATGGAGCAGATCTCTCCACGTTTTACAGTTGCAGCTTCGAGGGGTACCAAGACACACTCTATGCCCATTCCCTACGACAATTCTACAGGGAATGTGACATCTACGGCACAGTAGATTTCATATTCGGAAACGCTGCAGCTGTATTCCAGAACTGCAACATGTATCCTCGCCTCCCAATGAGTGGACAATTCAACGCTATAACCGCACAAGGCCGAACCGATCCCAACCAAAACACGGGCACTTCCATCCATAACTGTACCATTAGAGCAGCCGATGACTTGGCTGCAAGCAACGGTGCAGCTGCAACGTATCTGGGAAGGCCTTGGAAGGAGTACTCGAGGACGGTTTATATGCAGAGTTTCATGGACAGTGTGATTGATGGTGCTGGGTGGCGTGAATGGAATGGTGATTTTGCTTTGAGCACTTTGTATTATGCTGAGTTTAACAACACTGGAACTGGATCTAGCACTGCTAACAGAGTGACATGGCCTGGTTACCACGTGATTAACGCCACCGATGCTGCCAATTTTACTGTCTCTAGTTTCTTGCTTGGAGATGACTGGCTGCCCCAGACCGGAGTCACTTATACCAGTAACTTGATATAG 1704 0.4812 MASILPSVLTMSMFLLLLLPSFSSLAFADVPPATPVSPKTVCKSTPDPSYCNSVLPPQNGNVYDYGRFSVRKSISQARDFLNLVNKYLQRRSTLSTAAIHALEDCQTLGELNLDFLLSSFQTVNKQTKFLITLQADDIQTLLSAILTNQQTCLEGLQATASAWSVKNGLSVPLSNDTKLYSVSLALFTKGWVPNNKTKTNTAFQPTMTQLGFRNGRLPLKMSSRTRAIYERVSRRKLLGATTVGNHEVVVRDIVTVSQDGSGNFTTINDAIAAAPNKTSSTAGYFLIYVTAGVYEENVSIDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFKSATFAVVGRGFVGVNMTIRNTAGPEKHQAVALRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNMYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRAADDLAASNGAAATYLGRPWKEYSRTVYMQSFMDSVIDGAGWREWNGDFALSTLYYAEFNNTGTGSSTANRVTWPGYHVINATDAANFTVSSFLLGDDWLPQTGVTYTSNLI. 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07025 567 NCBIfam pectinesterase inhibitor domain 7 188 IPR006501 GO:0004857
Seca7g07025 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 189 IPR035513 -
Seca7g07025 567 CDD PMEI-like_3 40 191 - -
Seca7g07025 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 189 IPR035513 -
Seca7g07025 567 PANTHER PECTINESTERASE 19 556 - -
Seca7g07025 567 Pfam Pectinesterase 254 552 IPR000070 GO:0030599|GO:0042545
Seca7g07025 567 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Seca7g07025 567 SUPERFAMILY Pectin lyase-like 250 564 IPR011050 -
Seca7g07025 567 FunFam Pectinesterase 247 566 - -
Seca7g07025 567 SMART PMEI_2 33 186 IPR006501 GO:0004857
Seca7g07025 567 Pfam Plant invertase/pectin methylesterase inhibitor 39 186 IPR006501 GO:0004857
Seca7g07025 567 Gene3D - 248 566 IPR012334 -
Seca7g07025 567 FunFam Pectinesterase 39 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07025 Seca-Chr7 172964714 172967145 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07025 8 567 Carbohydrate Esterase AT4G02330 63.351 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07025 K01051 - gmx:100790729 934.095