Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g07008 | ATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGATATGGTAAGCGTAAGGGTACAAGAGAGGCAAGGCTCCCCACCAAAATTCTTTGGATGAGGAGGATGCGTGTGCTCAGACGTTTGCTTCGCAAGTACAGGGAATCAAAAAAGATTGACAAGCACATGTACCATGATATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGAGAGTCCTGATGGAGAGTATACACAAGTCCAAGGCTGAGAAGGCAAGAGAGAAGACTTTATCTGACCAGTTTGAGGCCAAGCGTGCAAAGAACAAGGCAAGCAGGGAAAGGAAAATTGCTCGGAGAGAAGAGCGCTTGGCTCAAGGTCCTGGTGAGAAGCCATCTGCTGCCCCTACTGCACCATCTGCCACAGCATCCCAGCCAGCTCAAGCACCAAAGAAATCCAAGAAGTAA | 444 | 0.4842 | MKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPGEKPSAAPTAPSATASQPAQAPKKSKK. | 148 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g07008 | 147 | SMART | Ribosomal_L19e_2 | 1 | 81 | IPR000196 | GO:0003735|GO:0005840|GO:0006412 | |
Seca7g07008 | 147 | Pfam | Ribosomal protein L19e | 2 | 80 | IPR000196 | GO:0003735|GO:0005840|GO:0006412 | |
Seca7g07008 | 147 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Seca7g07008 | 147 | MobiDBLite | consensus disorder prediction | 129 | 147 | - | - | |
Seca7g07008 | 147 | MobiDBLite | consensus disorder prediction | 79 | 147 | - | - | |
Seca7g07008 | 147 | SUPERFAMILY | Ribosomal protein L19 (L19e) | 2 | 79 | IPR035970 | GO:0003735|GO:0005840|GO:0006412 | |
Seca7g07008 | 147 | MobiDBLite | consensus disorder prediction | 79 | 119 | - | - | |
Seca7g07008 | 147 | FunFam | Ribosomal protein L19 | 1 | 127 | - | - | |
Seca7g07008 | 147 | Gene3D | - | 1 | 123 | - | - | |
Seca7g07008 | 147 | PANTHER | 60S RIBOSOMAL PROTEIN L19 | 1 | 123 | IPR039547 | GO:0003723|GO:0003735|GO:0022625 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g07008 | Seca-Chr7 | 172801474 | 172803590 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g07008 | 1 | 147 | Cytoplasmic Ribosomal Protein Gene Family | AT3G16780 | 82.313 | 9.85e-82 | 238 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g07008 | K02885 | - | gmx:100527501 | 260.766 |