Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07000 ATGGCGGCATTGTCATTTTCAGTGGCATCCGTGGTGGAGGATGTGCTTCAACAGCATGGTACTCGGCTTAAAGATCTTGATTTGGAATCCAGAAAAGCAGAGGAAGCTGCATTCAGAAGGTATGAAGCAGCAGGGTGGCTGAGAAAAATGGTCGGAGTTGTTGCTGCTAAAGATTTACCAGCAGAGCCCTCTGAGGAAGAATTTAGGCTTGGTTTGAGAAGTGGGATCATTTTATGCAATGTTCTTAACAAGGTTCAACCCGGTGCTGTACCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCACAAATCCCTGATGGAGCACCATTATCAGCATTTCAGTATTTTGAAAATGTGAGGAACTTTCTGGTGGCTGTCCAGGAAATTGGAATTCCTACCTTTGAAGCATCTGATCTGGAACAAGGAGGAAAATCAGCCAGGATTGTTAACAGTGTATTGGCCCTAAAATCCTATAGTGAATGGAAACAAACTGGGGCTAATGGTGTATGGAAATTTGGTGGAACTATCAAACCAACAACATCTTCAAAATCTTTTGTGAGAAAAAACTCTGAGCCATTTACTAATTCCTTGTCAAGGAACCCGTCCATCAATGAAAAATCTCTCACTGCTTCTACTTCTGACGTTGAGTCTAATAAAATGTATGGTTCTCATTCTTTAGGTATGCTTGTCCGTGCAATACTATTAGATAAAAAGCCAGAGGAAGTTCCAATGTTGATTGAATCCGTCTTGAATAAGGTTGTAGAGGAGTTTGAGCATCGCATTGCAAGCCAGGGTGAACAGACAAAAACAAGTTCAAGAGGTTCTGTGTCCCAAAGCAATGGATCTATATCAAAGTTTGTTATGGCAGATAAAAAGGCGGATAACAAGATTCCTGTGGCAACAAAGAAGGAGGAATTCATCCAAAAGAACCATGTTGCTGATGAGGAATCGCAAAGACAACTTCTGAAGCAGCAAATGCTCTTTGATCAACAGCAAAGAGATGTTCAAGAACTAAAGCATACAATTCAGATAACCAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAGTTCTCAAATATAGGCATGCACATTCATGGCTTAGCCCATGCTGCTTCTGGATATCACAGAGTTCTTGAAGAAAATCGCAAACTATACAATGAAGTCCAGGATCTTAAGGGTAATAAGATTACTGGAAGTATTAGGGTGTACTGTCGAGTAAGACCCTTCTTATCTGGACAACCAAATTATTTGAGCACAGTGGATAATATAGAAGATGGAACTATCACAATTAATATTCCTTCAAAGAATGGGAAAGGACGAAGATCCTTCAACTTCAACAAAGTTTTTGGACCATCTGCAGCCCAAGCGGAAGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTTCTTGATGGATATAATGTTTGCATATTTGCTTATGGACAAACAGGATCAGGAAAAACTTACACTATGACTGGACCGAAAGAGATCACAGAAAAAAGCCAAGGTGTAAATTACAGAGCTCTAAGTGATTTGTTTCTTACAGCAGATCAAAGAAACGACACTTTTCGCTATGATGTGTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGAACAAACAAAAGATATCCTTTTAAAATTCGCAGTAATTCTAATAGAGGGCTCAGTGTACCAGATGCATGCCTTGTCCCAGTATCATCAACAAATGATGTAATTGAACTAATGAACCTGGGCCATAGGAACCGTGCAGTCGGAGCAACAGCCCTTAATGACCGTAGTAGTCGATCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAGCTAGCTTACGCGGATGCATGCATCTGGTTGACTTGGCAGGAAGTGAAAGGGTTGACAAATCTGAGGCCACAGGAGATAGACTGAAAGAAGCACAACATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCCTACAGAAATAGCAAACTCACACAGTTACTCCAAGACTCACTTGGAGGACAGGCCAAGACACTAATGTTTGTTCACATAAGTCCTGAGGTTGATGCTATTGGAGAAACAATTAGCACCTTAAAATTCGCAGAAAGAGTTGCTACAGTTGAACTTGGCGCTGCTCGAGTAAACAAGGATGGGGCAGATGTCAAAGAGCTCAAAGAACAGATAGCCAACCTTAAGGCAGCATTGGCAAGAAAGGAGGGAGAATCAGAACATTCTTTATCTGGCAGCTCTGGAAAATATAGGACAACAGCAGCTAGTGAGCTATCTCCTTATCTTGCAAACCAGCGTGGTGCAGATATTGGGTGCCGGCAACCAATGCTTGATGTAGGCAACATAGAGGTATGTATACTTTATCTTCATAGTAATACCCCATTGAGGCAAAAAACTCAGAGCTTTGATTTTGATGAGATATCATCAAATTCACCACCCTGGCCCCCAGTGAAAAGTCCAGGACAAAACTATGGGGAAGATGATAAAGAAACTGTTTCAGGGGAGTGGGTTGATAAGGTAATGGTAAACAAGCAAGATGTAAACAAAACTGAGAACATGTTAGGGTGTTGGGAAGCAGACAATGGGCACTTACCTGAGGTCTTTTATCAGAAATATCTCCAAGATTCTTCCAAACTATACTCAGAACGACCTTACAATATGTTCATGGGAGGCAACAAGTTTCACACTGCTGGTTCTGATGACATGGATGATCTTGATGCTGCAACCAGTGATTCCTCAGAACCTGACTTACTTTGGCAATTTAATCACTCCAAACTTACCACCATAGCCAATGGAAATGGATCAAAGGCTTGGAGACCTGTCTTAAAGTCAGCAAAAAGTCCAGAATTAAGCAAGAATAATATTAATTCTTCTGTTGGTCCTTCACCTTCACCTTCACGGAAACAAACAAATGGAATTCGAACAGGAAGGCATCCAGCTCCAGTTGACATGAAACGGAAAACTGGGAATAGAAAATAA 3051 0.4113 MAALSFSVASVVEDVLQQHGTRLKDLDLESRKAEEAAFRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPKVVESPVDSAQIPDGAPLSAFQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSARIVNSVLALKSYSEWKQTGANGVWKFGGTIKPTTSSKSFVRKNSEPFTNSLSRNPSINEKSLTASTSDVESNKMYGSHSLGMLVRAILLDKKPEEVPMLIESVLNKVVEEFEHRIASQGEQTKTSSRGSVSQSNGSISKFVMADKKADNKIPVATKKEEFIQKNHVADEESQRQLLKQQMLFDQQQRDVQELKHTIQITKAGMQFMQMKFHEEFSNIGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGNKITGSIRVYCRVRPFLSGQPNYLSTVDNIEDGTITINIPSKNGKGRRSFNFNKVFGPSAAQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLTADQRNDTFRYDVSVQMIEIYNEQVRDLLVTDGTNKRYPFKIRSNSNRGLSVPDACLVPVSSTNDVIELMNLGHRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGASLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEVDAIGETISTLKFAERVATVELGAARVNKDGADVKELKEQIANLKAALARKEGESEHSLSGSSGKYRTTAASELSPYLANQRGADIGCRQPMLDVGNIEVCILYLHSNTPLRQKTQSFDFDEISSNSPPWPPVKSPGQNYGEDDKETVSGEWVDKVMVNKQDVNKTENMLGCWEADNGHLPEVFYQKYLQDSSKLYSERPYNMFMGGNKFHTAGSDDMDDLDAATSDSSEPDLLWQFNHSKLTTIANGNGSKAWRPVLKSAKSPELSKNNINSSVGPSPSPSRKQTNGIRTGRHPAPVDMKRKTGNRK. 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07000 1016 MobiDBLite consensus disorder prediction 190 209 - -
Seca7g07000 1016 Pfam Calponin homology (CH) domain 40 159 IPR001715 GO:0005515
Seca7g07000 1016 MobiDBLite consensus disorder prediction 263 280 - -
Seca7g07000 1016 SUPERFAMILY Calponin-homology domain, CH-domain 40 170 IPR036872 -
Seca7g07000 1016 PANTHER KINESIN-LIKE PROTEIN KLP-3 44 819 IPR027640 GO:0003777|GO:0007018
Seca7g07000 1016 Gene3D Kinesin motor domain 397 769 IPR036961 -
Seca7g07000 1016 Coils Coil 16 36 - -
Seca7g07000 1016 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Seca7g07000 1016 Pfam Kinesin motor domain 407 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca7g07000 1016 PRINTS Kinesin heavy chain signature 474 495 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca7g07000 1016 PRINTS Kinesin heavy chain signature 629 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca7g07000 1016 PRINTS Kinesin heavy chain signature 598 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca7g07000 1016 PRINTS Kinesin heavy chain signature 678 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca7g07000 1016 CDD KISc_C_terminal 400 730 - -
Seca7g07000 1016 MobiDBLite consensus disorder prediction 971 997 - -
Seca7g07000 1016 FunFam Kinesin-like protein KIN-14I isoform A 24 176 - -
Seca7g07000 1016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 401 760 IPR027417 -
Seca7g07000 1016 Coils Coil 376 396 - -
Seca7g07000 1016 FunFam Kinesin-like protein KIN-14I isoform A 391 770 - -
Seca7g07000 1016 Coils Coil 735 762 - -
Seca7g07000 1016 MobiDBLite consensus disorder prediction 261 280 - -
Seca7g07000 1016 MobiDBLite consensus disorder prediction 968 1016 - -
Seca7g07000 1016 ProSiteProfiles Kinesin motor domain profile. 401 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca7g07000 1016 MobiDBLite consensus disorder prediction 829 853 - -
Seca7g07000 1016 CDD CH_AtKIN14-like 39 156 - -
Seca7g07000 1016 SMART kinesin_4 399 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca7g07000 1016 Gene3D - 24 186 IPR036872 -
Seca7g07000 1016 SMART ch_5 39 157 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07000 Seca-Chr7 172741558 172748153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07000 384 728 Calmodulin-binding Proteins AT5G65930 42.000 3.98e-76 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07000 K10406 - gmx:100801279 1701.03