Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06999 ATGTCCGCCGATTCACATGCCCCTAAGGGTCTCCTCTGCAATGCCGGCGCTGGTGCTGCCGCTGGGGTTATTGCTGCTACGTTTGTGTGTCCTTTAGATGTCATCAAAACTAGGTTTCAGGTTCTTGGGGCGCCTCAGCTTGCTAATGGAACTGTTAAAGCAGGCAGTGTTATAGTTGGTAGCTTGGAGCAAATATTTCACAAGGAGGGATTGCGTGGCATGTACCGTGGGCTAGCCCCAACTGTGTTGGCCTTACTTCCAAACTGGGCGGTCTATTTTACCATGTATGAGCAGCTCAAGAGCCTGCTTTGTTCTAATGAAAGCCATCACCTTTCAATCGGAGCTAATATGGCAGCTGCTTCGGCTGCTGGAGCTGCAACTACTATTGTTACAAATCCGCTTTGGGTTGTCAAGACTAGACTCCAAACCCAGGGAATGAGACCTGGTATTATGCCATATAGGAGCACTCTATCTGCTTTGAAGAGAATTGCTCATGAGGAGGGCATTCGGGGGCTGTACAGTGGCCTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCAACATATGAGAAAATAAAATTTTATTTGGCAAATAAAGATAGCTCAGCAATGGATAAGCTAGGTGTACGTGATGTTGCAATTGCCTCATCAGTCGCCAAAATTTTTGCTTCTACATTGACATATCCTCATGAGGTTGTTCGTTCTAGACTGCAAGAACAAGGGCACCATTCGGAGAAGCGATACACTGGTGTGACTGACTGCATTAGAAAGGTTTTTCAACAAGAGGGGCTTCCTGGTTTCTACCGCGGGTGCGCCACCAACCTCCTAAGGACAACCCCAGCTGCAGCAATTACATTCACCAGCTTCGAAATGATACACCGTTTTCTTGTTTCACATTTTTCTTCTGACCCACTGCCACATATTTTGTAA 942 0.4692 MSADSHAPKGLLCNAGAGAAAGVIAATFVCPLDVIKTRFQVLGAPQLANGTVKAGSVIVGSLEQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTMYEQLKSLLCSNESHHLSIGANMAAASAAGAATTIVTNPLWVVKTRLQTQGMRPGIMPYRSTLSALKRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKFYLANKDSSAMDKLGVRDVAIASSVAKIFASTLTYPHEVVRSRLQEQGHHSEKRYTGVTDCIRKVFQQEGLPGFYRGCATNLLRTTPAAAITFTSFEMIHRFLVSHFSSDPLPHIL. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06999 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 199 IPR018108 -
Seca7g06999 313 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 1 108 - -
Seca7g06999 313 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 302 IPR044712 GO:0006862|GO:0055085
Seca7g06999 313 Gene3D Mitochondrial carrier domain 1 107 IPR023395 -
Seca7g06999 313 Gene3D Mitochondrial carrier domain 108 304 IPR023395 -
Seca7g06999 313 PRINTS Mitochondrial carrier protein signature 14 27 IPR002067 GO:0055085
Seca7g06999 313 PRINTS Mitochondrial carrier protein signature 77 97 IPR002067 GO:0055085
Seca7g06999 313 PRINTS Mitochondrial carrier protein signature 126 144 IPR002067 GO:0055085
Seca7g06999 313 PRINTS Mitochondrial carrier protein signature 27 41 IPR002067 GO:0055085
Seca7g06999 313 PRINTS Mitochondrial carrier protein signature 220 242 IPR002067 GO:0055085
Seca7g06999 313 SUPERFAMILY Mitochondrial carrier 10 295 IPR023395 -
Seca7g06999 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 299 IPR018108 -
Seca7g06999 313 FunFam NAD+ transporter 109 304 - -
Seca7g06999 313 Pfam Mitochondrial carrier protein 111 203 IPR018108 -
Seca7g06999 313 Pfam Mitochondrial carrier protein 11 105 IPR018108 -
Seca7g06999 313 Pfam Mitochondrial carrier protein 216 302 IPR018108 -
Seca7g06999 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 102 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06999 Seca-Chr7 172723912 172729166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06999 1 307 Chloroplast and Mitochondria Gene Families AT2G47490 77.670 5.41e-168 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06999 K15115 - gmx:100500213 522.702