Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g06963 | ATGGCTTCGAATCAACGTCCCTCGAGTTCGGGATCTGAAGGCGGAGATCCACATATGGACGAGAGGAAGAGGAAGAGGATGCTGTCGAACCGCGAATCGGCGAGGCGTTCGCGGATGAGGAAGCAGAAGCTTCTGGAAGACCTGACCGATGAAGTCAGCAAATTGCAAGGCGCGAACAAGCGTCTAGCTCAGAGCATAAAGGTGAAGGAGGAAGCGTTTATCGAGATGGAAGCTGCTAACGATGTATTGAAGGCTCAAACCATGGAACTCGCAGATCGATTGCGGTTTCTCAACTCCATTCTCGAGATTGCTGAAGAGGTCAGCGGCCTCTCTGTTGATATCCCTCAGATCCCAGATCCTCTCCTGAAACCCTGGCACATTCCTCATCCAATTCACCCTATCCTTTCAGGGGATGCCATGTTCCTGCAGTGA | 432 | 0.5185 | MASNQRPSSSGSEGGDPHMDERKRKRMLSNRESARRSRMRKQKLLEDLTDEVSKLQGANKRLAQSIKVKEEAFIEMEAANDVLKAQTMELADRLRFLNSILEIAEEVSGLSVDIPQIPDPLLKPWHIPHPIHPILSGDAMFLQ. | 144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g06963 | 143 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Seca7g06963 | 143 | Gene3D | - | 20 | 73 | - | - | |
Seca7g06963 | 143 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 20 | 67 | IPR004827 | GO:0003700|GO:0006355 | |
Seca7g06963 | 143 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 25 | 40 | IPR004827 | GO:0003700|GO:0006355 | |
Seca7g06963 | 143 | SMART | brlzneu | 18 | 82 | IPR004827 | GO:0003700|GO:0006355 | |
Seca7g06963 | 143 | SUPERFAMILY | Leucine zipper domain | 22 | 71 | IPR046347 | GO:0003700|GO:0006355 | |
Seca7g06963 | 143 | CDD | bZIP_plant_GBF1 | 23 | 73 | IPR045314 | GO:0003700|GO:0006355 | |
Seca7g06963 | 143 | PANTHER | BZIP TRANSCRIPTION FACTOR 44 | 8 | 104 | - | - | |
Seca7g06963 | 143 | FunFam | BZIP transcription factor | 20 | 71 | - | - | |
Seca7g06963 | 143 | MobiDBLite | consensus disorder prediction | 15 | 42 | - | - | |
Seca7g06963 | 143 | Coils | Coil | 31 | 65 | - | - | |
Seca7g06963 | 143 | Pfam | bZIP transcription factor | 22 | 71 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g06963 | Seca-Chr7 | 172273699 | 172274130 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g06963 | 20 | 141 | bZIP Transcription Factor Family | AT3G62420 | 54.918 | 2.28e-45 | 143 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Seca7g06963 | bZIP_1 | 1.3e-10 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g06963 | K25786 | - | gmx:780550 | 202.986 |