Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06959 ATGTCAGCAATATCATCCAGGGACTCTTCACAGACGGAGGAAAATAGGAAAAGCTCAATTCTCTCATCCAGAATTGATCATCCTTTGTGTAAATTCAATGGTTTCTCTCAAGTTTCAGGAGACAGAGACCACAACAATCAAGATGAATTATCTGCTACAAGCATCAAGATTCCATATATGGAAAGATTACCACCATATACATCTTGGATATTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTTGTTGGAAGAAGGCGTATCTACTATGATCAACATGGAAGTGAAGCACTAATATGTAGTGACAGTGAGGAAGAGATAACAGAACCTGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTATTCTATGGATGGCATTTGAGGAACATGGTTTAAATGAGGAGGTATTGAATATTGTTAGCAAGTCCGTTGGAGGTACCAATTTAGAAATTCAGGAGAGGTACAAAAGTATCAAGGAAAATAATATTGGTAGGCTTGACCAACATTCAGAAGGATCAGGAGAATATGAATCTCCTGTTGGCATATGTCCAGAGAAAAGCCTTAGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGGTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATCTATCCTCGTGAAAAACAGACAGTTTGGTCTGAGCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGGAAAAATGTGTAAACACTGATTGCCATTCAATTTCCCAGCAGTTAAAGGCTGTCAAAAGTTTGACAGATTCAACTCCAGGGTCTTTTCAGGATAAGAAAACTACAATTATAGAAGAGGCAGATGGGATATTGGCACCATCCAGTGCAGAGGAACCTGATAATCAGAGTACCGCACTTCCAACAGAAGTTGATTGTCATGGATATCTCAATTTAAATGCTCCTGTCTCAGAAAATTTGGGGAAACGAAAGGTCACAGATCAATCAGACACAGAACTATGTGACTCCATATTGCCTCCTGATGATCCTCAGAATTCTTGTAAAAAGCTGAAGAGAGTCTCAGATGATGTAGGTACTGTAATTAGTGATTATAACAAGAACCTAAATTTAGGTGCATGTGATGAAAGTAAACATATAATTACTAGTGCAATTTTGGAAAAATCTGTTGAACACGCTTCAAATAAATTAATAGTTTCTTCAAGCACTTGCCATGGTGAGCATGACAAAAGTGTTGGGGATGGACCACAAGATGTCACAAATGAGACAGAAATTAAAAAGTTGTCCAATTCAATGGAAGGGCAAGTGGATGCGATGCTAAGTCTCTCGGATTGGAAACCTCTGGAGAAAGAGTTATACTTGAAGGGAGTTGAAATGTTTGGCAGAAACAGTTGCCTCATCGCAAGAAACTTACTTTCTGGTTTGAAGACTTGCGTGGAAATAGCTAGTTACATGCATGCTGGAGGAGTGTCGATGCCCCACAGATCTCTTGTTGCTCCTAGTTCAATCATGGACGACAAGGGAAAATTTGACGGAGAGTGCACAGACCAAGACATGCCATCTAGGTCACGGTTGCTGAGAAAAAGGGGTAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCTTCAATATGGAAAAGAATTGCTGATGGTAAAAATCAATCTTGCAAGCAGTATACACCATGCGGATGTCAGTCAATGTGTGGAAAGGATTGTTCTTGTGTTAATGGTGGAACTTGCTGTGAAAAATATTGTGGTTGTTCAAAAAGCTGCAAAAACCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGCCCATGTTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGGCATGGAGAAGGTCAATGCGGCAATATGAGGCTCCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCTGTTAACAAAAATGATTACCTTGGAGAGTACACAGGGGAACTAATCTCCCACAGAGAAGCTGATAAGCGTGGGAAAATATATGATCGTGCCAATTCATCTTTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTACCGCAAAGGAGACAAGTTGAAATTTGCGAACCACTCATCAAACCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTCGCCAAGGAACACATTGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTACGGTCCAGATCAAGCACCCCCATGGGCTCGTAAACCTGAAGGTTCCAAGAGAGACGAATCAGCAGTTCCTCAAGGCAGAGCAAAGAAACACCAATCTCATTGA 2451 0.417 MSAISSRDSSQTEENRKSSILSSRIDHPLCKFNGFSQVSGDRDHNNQDELSATSIKIPYMERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEEITEPEEEKHEFSEAEDRILWMAFEEHGLNEEVLNIVSKSVGGTNLEIQERYKSIKENNIGRLDQHSEGSGEYESPVGICPEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLIYPREKQTVWSEPEGDRKPCSDQCYLQEKCVNTDCHSISQQLKAVKSLTDSTPGSFQDKKTTIIEEADGILAPSSAEEPDNQSTALPTEVDCHGYLNLNAPVSENLGKRKVTDQSDTELCDSILPPDDPQNSCKKLKRVSDDVGTVISDYNKNLNLGACDESKHIITSAILEKSVEHASNKLIVSSSTCHGEHDKSVGDGPQDVTNETEIKKLSNSMEGQVDAMLSLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCVEIASYMHAGGVSMPHRSLVAPSSIMDDKGKFDGECTDQDMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKDCSCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRHGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESAVPQGRAKKHQSH. 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06959 816 SMART CXC_2 602 639 IPR033467 -
Seca7g06959 816 MobiDBLite consensus disorder prediction 793 809 - -
Seca7g06959 816 Pfam CXC domain 606 637 IPR041355 -
Seca7g06959 816 MobiDBLite consensus disorder prediction 1 20 - -
Seca7g06959 816 Coils Coil 810 816 - -
Seca7g06959 816 MobiDBLite consensus disorder prediction 787 816 - -
Seca7g06959 816 SUPERFAMILY SET domain 538 786 IPR046341 -
Seca7g06959 816 CDD SET_EZH 667 783 - -
Seca7g06959 816 Pfam SET domain 678 781 IPR001214 GO:0005515
Seca7g06959 816 ProSiteProfiles CXC domain profile. 554 653 IPR026489 -
Seca7g06959 816 ProSiteProfiles SET domain profile. 667 782 IPR001214 GO:0005515
Seca7g06959 816 FunFam Putative histone-lysine N-methyltransferase EZH2 568 784 - -
Seca7g06959 816 Gene3D SET domain 568 784 IPR046341 -
Seca7g06959 816 SMART set_7 667 788 IPR001214 GO:0005515
Seca7g06959 816 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 816 IPR025778 GO:0031519
Seca7g06959 816 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 7 815 IPR045318 GO:0006338|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06959 Seca-Chr7 172234902 172244079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06959 656 785 C2H2 Transcription Factor Family AT2G23740 26.531 4.28e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca7g06959 SET 9.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06959 - - gmx:100808730 1415.59