Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06958 ATGGAGTTACTGGGAGGGATCAATCCTCTTCCTATTACTACTGAACATGAGAACGAAACCCATTTCTTCAAAGACCAAAACCACCACCAGCAACAAGATTTCAACTTTGATAACTTGATTCTAGAAGATTTCAACTTTGAACCTACTCTGGAACCAACACATGGGTTTCAAGAAACAAGAGGGATAAAGAATCAAGAAGTGGCAAGTCCACAACTTGTTAGATACAAGAAGCAAGCTCCACCATCTTCTTTAGCATCACTAGAGCTTCTGAAGAATTATGGAGGCAGGTTCAAGTGGCTAAAGGGAAAAAACCTAAGAAAAATTGAAACTTGTGTGAGTCCCCAGAACCAGAAGTTGTCAACTGAAGACATAATAAGAGTGGCAGGAGCAAGGTATATCCAACACTCAACACAATGGCATGATAATCTTTGCATCCCTATGCATCCATATGGAACTGGTCTTGTGGGTTTGTCTGAGGAAGAAAATAGAGATGTTGAACTTGCTCAGTTTCTTCTTGCAGCAGCAGAGAGGGTAGGGTGTCAACAATTTGAACGTGCAAGCATGTTACTTTACCATTGTCAATTGAATTCACCAGATGGTGGAAGCCCTGTTCAGCGAGTTGTCTTTCATTTCGCTCAAGCTCTCAGAGAAAGAATCAACAAAGAAATTGGAGGAAGGGTGGCATTGAAGGGAAGTGAGAAAAATGAGGAAAGGGAATTGATTGAGAATTTGTTATTGGATACTAACATAGCCATTATATGTCATCAAAAAATTCCTTTCAATCAGGTGATGCAGTTTCCTGGTGTACAAGCTATAGTGGAACATGTTGCATCCCAAACCAAAATCCATCTGATAGATCTTGATATTGGATATGGGGTGTTATGCACATGTGTCATGCAAGCTTTGGCAGAGCGCAAGGAAAGGCCAGTTGAGCTTCTGAAGATCACTGCCATTGGAATTGAAGGCAAGATCAACCTAGAAGAGACAGGAAAAAGGTTAATGAGTTTTGCTAAATCCTTGAACTTGCCCCTTTTATATAAAACAATTTATGTTACAGATATGATAGAGATCAAGGTAGAGCAATTTGAAATTGAAGATGATGAAGCTGTGGCTATCTATTCTCCTTATTTACTAAGGACTATGGTATCAAATTCTGATTGCTTGGAGAACTTGATGAAGGTGATAAGGAAAATCAAACCATCTATAATGATAGTTCTTGAATTGGAAGCAAACCATAATTGTCCCTCCTTTGTGAATCGCTTTGTTGAAGCATTGTTCTTCTTTTCCGCATATTTTGACTGCATTGAGACCTGCATAAAACAGGATTATGAGTGCAGAATGAGAATGGAAACAATATTAGCTGAAGGGATAAGAAACATTGTTGCTATGGAAGATAGAGAAAGGACAGTTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACAGAATGGTGGAAACTGGATTTAGCGAGTCATCTTTGTACCAAGCTAACTTGGTTGCCAAGAAATTTGGTTGTGGGAATTTCTGTACTATAGATAAAAATGGGAAATGTCTAATAGTTGGATGGAAGGGAACCCCAATTCATTCAATCTCAGCTTGGAAGTTTCTTTGA 1623 0.3894 MELLGGINPLPITTEHENETHFFKDQNHHQQQDFNFDNLILEDFNFEPTLEPTHGFQETRGIKNQEVASPQLVRYKKQAPPSSLASLELLKNYGGRFKWLKGKNLRKIETCVSPQNQKLSTEDIIRVAGARYIQHSTQWHDNLCIPMHPYGTGLVGLSEEENRDVELAQFLLAAAERVGCQQFERASMLLYHCQLNSPDGGSPVQRVVFHFAQALRERINKEIGGRVALKGSEKNEERELIENLLLDTNIAIICHQKIPFNQVMQFPGVQAIVEHVASQTKIHLIDLDIGYGVLCTCVMQALAERKERPVELLKITAIGIEGKINLEETGKRLMSFAKSLNLPLLYKTIYVTDMIEIKVEQFEIEDDEAVAIYSPYLLRTMVSNSDCLENLMKVIRKIKPSIMIVLELEANHNCPSFVNRFVEALFFFSAYFDCIETCIKQDYECRMRMETILAEGIRNIVAMEDRERTVRNVKIDVWRRFFARYRMVETGFSESSLYQANLVAKKFGCGNFCTIDKNGKCLIVGWKGTPIHSISAWKFL. 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06958 540 ProSiteProfiles GRAS family profile. 158 538 IPR005202 -
Seca7g06958 540 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 124 528 IPR005202 -
Seca7g06958 540 Pfam GRAS domain family 168 538 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06958 Seca-Chr7 172231252 172232874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06958 155 539 GRAS Transcription Factor Family AT3G03450 27.919 2.57e-46 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca7g06958 GRAS 6.5e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06958 - - gmx:100791952 688.723