Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06940 ATGGAGAAGAAGAAAGAGAATATGGCTGTGAAGACTGAGGATGGTGTTGTTGGTTCCTCTTCTTTCCCTGGTAATTATAATTCAAACGGTTATCCATTCTCTAACGTGTTTGATTACTCTGAGGTGGAAAAGAGCTCTCTAGGGTTTATGGAGTTACTGGGTGTTCAGGACTATAGTCCTCTGCTTGATTTACCACAACTATCAACTATGACTACTTCTGTGGTTGTGACTCATCACCACCCTAATAAGGTTCCATCTGACACTGGGAAAGACTGTTCTGAGGTCTTGAACCACCAACCTGCCACTCCTAACTCTTCTTCCATTTCATCAGCTTCCAGTGAGGCTGTCAATGATGAACAGACTAAGACTGTAGACCAACCAGAAGAACAAGAAGAAGAAGAACACCAAAAGACCAAGAAACAGTTGAAGGCTAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACTAAAAGCGAGGTCGATCATCTCGAAGATGGATACAGATGGAGAAAGTACGGTCAAAAGGCTGTGAAAAACAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGCTTCATGTAATGTGAAGAAACGCGTGGAACGATCTTTCACTGATCCAAGCGTTGTAGTCACAACCTATGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGTTCAGGCCTCGCCGGAGCTCCGGTACGGCCAGGTGGTGTCTCCGCCACCAACTTTGCTTCAGTTCTGTCAGGAAACTACTTATCTCAGTATCAGAACCTCCACCACCAGCACCAACAACAACTACTTGTCAATACGTTGTCGTCTTTGGGTTTCCCTAATTATAATGATTCTTCATCTTCAAAGAACGGTGCTTTTACTCAAGAGAGACAGCTTTGTAATCCAGGGACTACTGCATTTTTAAGGGACCATGGACTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGTAG 993 0.4441 MEKKKENMAVKTEDGVVGSSSFPGNYNSNGYPFSNVFDYSEVEKSSLGFMELLGVQDYSPLLDLPQLSTMTTSVVVTHHHPNKVPSDTGKDCSEVLNHQPATPNSSSISSASSEAVNDEQTKTVDQPEEQEEEEHQKTKKQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGLAGAPVRPGGVSATNFASVLSGNYLSQYQNLHHQHQQQLLVNTLSSLGFPNYNDSSSSKNGAFTQERQLCNPGTTAFLRDHGLLQDVVPSHMLKEE. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06940 330 Pfam WRKY DNA -binding domain 169 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g06940 330 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 96 268 IPR044810 GO:0003700
Seca7g06940 330 MobiDBLite consensus disorder prediction 79 153 - -
Seca7g06940 330 MobiDBLite consensus disorder prediction 92 120 - -
Seca7g06940 330 ProSiteProfiles WRKY domain profile. 163 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g06940 330 MobiDBLite consensus disorder prediction 121 140 - -
Seca7g06940 330 MobiDBLite consensus disorder prediction 1 24 - -
Seca7g06940 330 PIRSF WRKY_txn_fact_IIc 1 330 IPR017396 GO:0003700
Seca7g06940 330 Gene3D WRKY domain 152 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g06940 330 SMART WRKY_cls 168 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g06940 330 Coils Coil 128 152 - -
Seca7g06940 330 SUPERFAMILY WRKY DNA-binding domain 160 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g06940 330 FunFam WRKY transcription factor 57 154 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06940 Seca-Chr7 172109369 172111225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06940 31 330 WRKY Transcription Factor Family AT2G47260 49.697 1.95e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g06940 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06940 - - aprc:113872234 455.677