Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06936 ATGATTTGGTCAAAAGCATCTTCTGTAGCTCAAGTGGTGACTAAGTTACGAGAGAGAGGAGCAATGGAATACACTATTATAGTAGCTGAAACAGCGGATTTTCCAGCTACATTACAATACCTCACTCCTTATACAGGAGCAGCTCTGGCTAAATATTTTATGCACCGTGAACGCCACACTTTAATAATTTATGACGATCTCTCTAAACAAGCACAGACTTATCGCCAAATGTCTCTTCTATTACGAAGACCGCCGGGTCGTGAAGCTTATCCGGGAGATGTTTTTTATTTGCATTCGCGTATTTTGGAAAGAGCCGCCAAATCAAGTTCTCAGTAG 336 0.4137 MIWSKASSVAQVVTKLRERGAMEYTIIVAETADFPATLQYLTPYTGAALAKYFMHRERHTLIIYDDLSKQAQTYRQMSLLLRRPPGREAYPGDVFYLHSRILERAAKSSSQ. 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06936 111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 110 IPR027417 -
Seca7g06936 111 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 4 111 IPR005294 GO:0015986|GO:0045261|GO:0046933
Seca7g06936 111 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 5 109 IPR000194 GO:0005524
Seca7g06936 111 Gene3D - 1 111 - -
Seca7g06936 111 FunFam ATP synthase subunit alpha, mitochondrial 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06936 Seca-Chr7 172061611 172061946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06936 16 107 Primary Pumps ATPases(2) AT1G20260 30.108 2.67e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06936 K02111 - rcu:11542288 195.667