Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06914 ATGGTGGCTGAAGCAGAGCTTGTGTGTCAACAGAACGTGGGTGTGTTAGATGTGAAGTATTTTCCAAATAAAGGGAGCAATTTTAACGAGATCGGAGATGCAGATGCCATATCGCCTCCGAGTTTTGACCGAGTTCGTGCTTCTGAATCAGTTTCCGCTGAGTTACTCACTTCACAAGAAGATGTTAAGACTGCAGACATAATCTCAGATGCTGCTCTTGAATCTGCGGTTATGCAATTTGTCCCCTGCATCCGTTCTGGTAGTTTTGCTGACATTGGTCCACGGAGATACATGGAAGATGAACACATAAGGATAGATGATTTGTCTTCTCATCTGGGATCACTATACAACTTTCCTAAACCAAGTGCCTTTTATGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCAGCTTATATAAGAAAAAATGTGATAAAATTCTTCTTTGAGGATGTCAGTTTCCCTCAGACATCTGAAGTTGATAACGTATTTTTACAAGAGGTAGAGAATTCCCTCAGAAAGGCATTTCTTTTGGCTGACTCAGCTCTGGCTGATGATTGCAGTGTGAATACTTCATCAGGGACCACGGCCCTTACTGCTTTGATATTTGGAAGGCTCCTAATGGTGGCCAATGCTGGTGACTGTCGAGCAGTTCTCAGTCGCAAAGGAGAGGCCATTGACATGTCTCAAGATCACAGGCCTATTTATGCATCAGAGCGGAGGAGAGTTGAAGAATTGGGTGGCTACATAGATGATGGTTATCTCAATGGGGTTTTATCAGTTACTAGAGCACTAGGAGACTGGGACATGAAGTTACCAAAGGGTGCTCCTTCACCTTTGATTGCAGAACCTGAATTCCGGCAAGTGGTTCTAACAGAGGATGATGAATTCCTTATCATAGGATGTGATGGTATCTGGGATGTGATGTCAAGTCAGCATGCTGTTAGCCTTGTTAGGAAAGGCCTGAGGAGGCATGATGACCCAGAGAAGTGTGCCAGGGACCTGGTTATGGAGGCATTACGCCTTAACACATTTGACAATCTCACAGTGATCATTGTATGTTTCTCTTCCCTTGACCACAGGGAGCCAGAGCCATCCCCACCTCGCCAACGGAAATTGAGATGTTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGGAGCTTGTTGGAAGGCAGTGCTAGCAACTGA 1191 0.4534 MVAEAELVCQQNVGVLDVKYFPNKGSNFNEIGDADAISPPSFDRVRASESVSAELLTSQEDVKTADIISDAALESAVMQFVPCIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLYNFPKPSAFYGVFDGHGGPEAAAYIRKNVIKFFFEDVSFPQTSEVDNVFLQEVENSLRKAFLLADSALADDCSVNTSSGTTALTALIFGRLLMVANAGDCRAVLSRKGEAIDMSQDHRPIYASERRRVEELGGYIDDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCFSSLDHREPEPSPPRQRKLRCCSLSAEALCSLRSLLEGSASN. 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06914 396 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Seca7g06914 396 SMART PP2C_4 75 353 IPR001932 -
Seca7g06914 396 Pfam Protein phosphatase 2C 95 347 IPR001932 -
Seca7g06914 396 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Seca7g06914 396 CDD PP2Cc 84 355 IPR001932 -
Seca7g06914 396 FunFam Probable protein phosphatase 2C 22 69 358 - -
Seca7g06914 396 Gene3D - 74 362 IPR036457 -
Seca7g06914 396 PANTHER PROTEIN PHOSPHATASE 2C 72 353 IPR015655 GO:0004722|GO:0006470
Seca7g06914 396 SUPERFAMILY PP2C-like 78 357 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06914 Seca-Chr7 171800041 171802933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06914 98 392 PP2C-type Phosphatase Gene Family AT3G62260 71.284 7.47e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06914 K14803 - gmx:100819791 740.725