Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06877 ATGGAAAACCGCCACGAAATGCAACAACAACGCCGTGAATTGACTTTCTTAAGCTCCGCAGACTTCCTCCGCTCGAATCTAGATCCAACAACTACCGATGCTGCTTCCATCAAAGAAGTTGATTTTTTATCACCTTCCAACCATAATGACCACCAGCAGCCTCATCATGATCAAGATGATCCGCATCATCGTCAACTAACCGCGCTGAATTTAACATGTGCAAGTGCGGGAATGTCAAGAGCAGCAAATGATGAAAATCCTAATACTACGTTGAGGACACTTCAAAAGGAATTACTAAGGGTAAAGGAAGAGAATTGCAAGCTGAGAACTATGCTGGACCAAATTACCAAAAACTATAGTCAACTACAACTGTTCATCGCTTTGCAGAAACAAAGGCCTTGTCAGAAGGTGGAGACAAATGGGGTGAAGTCGGGTCAACAATTTCTGGACCCACGGCCATGCACCAAATTAGACGCTAATGTTGGATCAGTTACTGATGATAAGACTTGTCAAGAGGTATCGGTCCCTCCCTCAAAGCAAAGTGACCACCAATCCAATATTGGAAAGCAGGCTTGTCCTCCTGCAGAAGAATCATCCTCACTGAGTTGGGACTCATCCAAGTTACAAGAATCCAAAATTCCTTTCCGAAAAACCAGGGTTTCCGTTCGTGCAAGATCCGAAGCTCCTCTGATTAACGATGGATGTCAGTGGAGGAAATATGGGCAAAAATTGGCCAAGGGTAACCCTTGTCCTCGTGCCTATTATCGCTGTACCATGGCTGCAGGATGCCCGGTTCGTAAGCAGGTGCAAAGATGTGCAGATGACAAAACGGTTTTAATAACAACTTATGAAGGGAATCATAACCACCCTCTCCCACCAGCAGCAACTGCCATGGCCAATTCTACATCAGCAGCTGCGGCCATGCTGCTATCCGGTTCAGGTTCATCAATGAGCCACAACGAAACGCTAATGAACTCTTGTGGATATTTCTCTTCACTTCCCTGTGTCTCAATGTCAGCCTCTGCACCATTCCCTACTATCACCCTTGACATGACCCGCCCCATGCAGTTGCACCGAGATCCCTCCTCCTTCCCTGTTCCATTCCATGCATCTGCTATTCCTATTCCTCAGTTACTAGCTGGCCACCCTGTTATCTTCCCTCAGAAGCTTCCACCTCCGCCACTAATGCAACGACAACCTTCCTCTATGGTGGATACTGTCACTGCAGCTATTGCTTCCGATCCAAACTTCACTGCTGTGCTGGCAGCTGCAATCTCATCCTTTATTGGACCACCAAGAGGAAGCAGTGATGGAAATAACAACAATGGCGGAAGGTCCATGCAACTTCCGCAACCATGCACACTGCATATCACGTCACCAACTAGCTAG 1389 0.4694 MENRHEMQQQRRELTFLSSADFLRSNLDPTTTDAASIKEVDFLSPSNHNDHQQPHHDQDDPHHRQLTALNLTCASAGMSRAANDENPNTTLRTLQKELLRVKEENCKLRTMLDQITKNYSQLQLFIALQKQRPCQKVETNGVKSGQQFLDPRPCTKLDANVGSVTDDKTCQEVSVPPSKQSDHQSNIGKQACPPAEESSSLSWDSSKLQESKIPFRKTRVSVRARSEAPLINDGCQWRKYGQKLAKGNPCPRAYYRCTMAAGCPVRKQVQRCADDKTVLITTYEGNHNHPLPPAATAMANSTSAAAAMLLSGSGSSMSHNETLMNSCGYFSSLPCVSMSASAPFPTITLDMTRPMQLHRDPSSFPVPFHASAIPIPQLLAGHPVIFPQKLPPPPLMQRQPSSMVDTVTAAIASDPNFTAVLAAAISSFIGPPRGSSDGNNNNGGRSMQLPQPCTLHITSPTS. 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06877 462 SMART WRKY_cls 231 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g06877 462 ProSiteProfiles WRKY domain profile. 226 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g06877 462 MobiDBLite consensus disorder prediction 169 208 - -
Seca7g06877 462 Pfam WRKY DNA -binding domain 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g06877 462 MobiDBLite consensus disorder prediction 430 462 - -
Seca7g06877 462 Gene3D WRKY domain 216 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g06877 462 MobiDBLite consensus disorder prediction 432 462 - -
Seca7g06877 462 SUPERFAMILY WRKY DNA-binding domain 224 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g06877 462 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 77 441 IPR044810 GO:0003700
Seca7g06877 462 FunFam probable WRKY transcription factor 31 216 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06877 Seca-Chr7 171393053 171395452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06877 6 454 WRKY Transcription Factor Family AT4G01720 41.584 7.02e-79 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g06877 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06877 - - gmx:100785933 446.817