Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06867 ATGACCAATACAATGAAGCTGATTTTGATAGCAGTTGAATTTGCATGCTTAGTTTCTGGGATTATCTCCTCTGGATCTGAGACACTGTCTATGCTTTCTTTCTTAGAAAACGGTGTCGTTTCAGCAATGCCTTTCTCCTCACCCCAACCTCTTATGGTCAACCTCACTCTTATTCAAGGAGCTGATTCTAAAGGAGCTGTCTGTTTGGATGGAACATTACCTGGTTACCATTTGGATCCTGGATTTGGATCTGGTTCAAATAGTTGGCTTGTTCATTTGGAGGGAGGAGGATGGTGTAATACCATCAGAAACTGTGTCTATAGAAAAAATACTCGCCGTGGTTCCTCAAATTACATGGAAAGTCAAATACCATTCACAGGAATATTAAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTCAAGTTAAGGTACTGTGATGGAGCATCTTTCAGTGGAGACAGTGAAAATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAATTATGGCTAGCTGCAATGGAGGAGTTAATGTCCAAAGGAATGCAGACAGCTGACCAGGCCCTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCCATAATACATTGTGATGAGTTTCAGAGCTTGTTTCCAAATTCTTCCAAAGTGAAATGTTTGAGTGATGGAGGCTTTTTTCTTGATGCAATTGATGTATCTGGGGGGCGCACACTGAGGAATATGTTTGAAGGTGTAGTTCAGTTACAGGAAGTACAAAAAAATCTGCCAAAAAGTTGTCTTGACCAACTGGACCCAACTTCGTGCTTCTTTCCTCAGAATTTGGTCAAACATATAGAGACCCCATTGTTTCTACTCAACGCGGCTTATGATGCATGGCAGGTCCAAGCCAGTTTAGCCCCACCATCAGCTGACCCTCTTGGCTCTTGGAATGACTGCAGATCAAACCATGCAACTTGTAACTCATCTCAAATTCAATTCCTTCAAGCAGACTTCAGAAATCAAATGCTAAATGACGTGAAAAACTTCTCAAAGTCATCTCAAACTGGACTGTTCATAAATTCCTGTTTTGCTCATTGCCAATCTGAGAGACAGGAGACATGGTTCGCTGATGACTCTCCCCTTATTGAGGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTCGAACGAGAAGCTGTCAAAGCTATTGACTGTGCTTACCCCTGTGACAACAGCTGCCATAATCTGGTCTTTAAGTGA 1254 0.4242 MTNTMKLILIAVEFACLVSGIISSGSETLSMLSFLENGVVSAMPFSSPQPLMVNLTLIQGADSKGAVCLDGTLPGYHLDPGFGSGSNSWLVHLEGGGWCNTIRNCVYRKNTRRGSSNYMESQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSENESAQLQFRGQKLWLAAMEELMSKGMQTADQALLSGCSAGGLASIIHCDEFQSLFPNSSKVKCLSDGGFFLDAIDVSGGRTLRNMFEGVVQLQEVQKNLPKSCLDQLDPTSCFFPQNLVKHIETPLFLLNAAYDAWQVQASLAPPSADPLGSWNDCRSNHATCNSSQIQFLQADFRNQMLNDVKNFSKSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFEREAVKAIDCAYPCDNSCHNLVFK. 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06867 417 Pfam Pectinacetylesterase 48 396 IPR004963 GO:0016787
Seca7g06867 417 PANTHER NOTUM-RELATED 35 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06867 Seca-Chr7 171264020 171269177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06867 45 417 Carbohydrate Esterase AT1G57590 71.314 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06867 K19882 - gmx:100786972 754.977