Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06862 ATGGGTAATGGTACTTCTCGTGTTGTTGGCTGTTTGGTGCCATTCAATGGCAAAAGTGGGGTTGATTTGGAGTTTTTAGAGCCATTAGATGAAGGGTTAGGCCATTCATTCTGTTATGTGAGGCCATCCATTTTTGAATCTCCTGCCATTAGCCCATCAAACTCTGAGAGGTTTACAGTTGATTCCAGTACCCTTGATTCTGAAACCTTGAGTGGATCCTTTAGGCATGATAGCATGGAAGATTCTACTGGCATACACAAGCCAGGTAAGAATTTTCCAGAAACCACATTCAAAACCATTTCAGGGGCTTCTGTTAGTGCTAATGTTTCCACTGCAAGGACTGGTAACCAGAGTGCATTGTTTGCTAGTGATGTCCTGGAACCTGCTGCATCATTTGAGGGAACTGCTTCATTTGCTGCAATCCCTCTGCAGCCCGTTCCACGTGGTTCTGGACCTTTGAATGGTTTCATGTCTGGACCTCTGGAGAGAGGTTTTGCCTCAGGTCCATTGGATAGAGGTGGTGGATTCATGTCTGGGCCAATAGAGAAGGGGGTCATGTCAGGTCCTCTTGAGGCCACTGACAAGTCCAATTTTTCAGCACCCCTTTCACGCAGTCGTCGAAGGCCACGTCTACAACATCTCATGAGAAGTGTTAGTGGACCAATGAAGAACACTTTATCCCGGACCTTCTCTAAACATTCCATGGGTGGCAGTTGGATGCAAAGGTTATTCGTACACCCAGTGACTCAACTAGCCTGGCATTCCAAAGACACAAAGTTTCGACCAGAAGTCTCTAGGAACTGTATTGAAGTTGGACCATATGAAGCGGAGTATAAACATACACACAATTTGCAGTGGGCTCAAGGCAAGGCTGGTGAAGACAGGGTTCATGTAGTGCTTTCGGAAGAACAAGGGTGGTTGTTTATTGGGATTTATGATGGTTTTAGTGGACCTGATGCACCTGATTTTCTGATGAGCCATCTTTATAGATTTATAGACAAAGAATTGGAAGGTTTACTTTGGGATTATGAAGATAAACCTGTAGATCCACTTAAACCTGAAGTCCCTGAAACTGTAAAAGCTGTGGTTGCTCCAGAATGCAGTAGGCAGGAATTGTCTAATACTCATACTAATTCAAATCAAGAAAGTTTAGAAACTTCTTCTGGTCCTGTAATGATCAATGATCAATCATCTAACAGTGAGATAGTTGAGGAAAATGCTGAAGTTAAGGTGAATGTTGAACACCAGTTACCTAATTGTGGAAGTCCTAGTATCTCGTGTACTGTTCCACCTTCTGTTCAACTCGGACAGTTGACTGGAAAAGGTAGAAAAAGTTTGAGGCTTTATGAGCTACTTCAGATGGAATCTTGGGATGAACAAGGTTTTTGGTCAGTCTCAGAACAGTGTAAAGATTCTTCAGTTCCTAGGGAACCAACAGTAGATGGGCAGATGAGACCTTGCTCATCTAATGTAAAAGAAGATAGATCTAGACATCAGGATGAAGGTCCCACTACATCAGGAGAAAATGGAGGCACTAGGTTTGATTCAACCAACCAGGAGCCTGAAGCTGTTTTTTCTGTTTCAGGACAAAGGCAGAATTCAAGAAAGTCATTTATAAGTACAAAAATAAAAAAAATGTACAGGAAGCCAAAGTCCTTGTGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAAGTTCTATTGATGAGAAAATATTGGAAGCCTCAGGACCAATTAGAAAATGTAAGTCTGGAGTAGATCATAATGCGGTTTTAAGAGCAATGGCCCGAGCTCTTGAAAAAACAGAAGAGGCATACATGGAAATGGTAGAGCATAATCTGGACAAAACTCCAGAGCTTGCTTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGAGATAGTCGTGTGATTTTGGCTCAAGAAAGACCAAATGATCGTCATCCTAATCCAAGTTTTCTCAAGGATGATGTGAGGCATAAAAATCGATCTAGAGAGTCATTAGTACGCATGGAGCTAGATAGGATTTCAGAGGAGTCCCCAATTCACAACCAAAACAATCATGTTAACAAGATGAACAAAAACCGAGAGATATCCATTTGTAGATTAAAAATGAGAGCTCTTCAGCTTTCCACAGATCACTGTACAGGTGTTGAAGAGGAAGTTTTTAGAATAAGAGCAGAACATCCTGATGATAATCAAGCCATATTAAATGATCGAGTTAAAGGACATTTAAAAGTCACCAGGGCATTTGGTGCTGGGTTCTTGAAGAGGGTCAGTTGA 2322 0.4165 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAISPSNSERFTVDSSTLDSETLSGSFRHDSMEDSTGIHKPGKNFPETTFKTISGASVSANVSTARTGNQSALFASDVLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPIEKGVMSGPLEATDKSNFSAPLSRSRRRPRLQHLMRSVSGPMKNTLSRTFSKHSMGGSWMQRLFVHPVTQLAWHSKDTKFRPEVSRNCIEVGPYEAEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFIDKELEGLLWDYEDKPVDPLKPEVPETVKAVVAPECSRQELSNTHTNSNQESLETSSGPVMINDQSSNSEIVEENAEVKVNVEHQLPNCGSPSISCTVPPSVQLGQLTGKGRKSLRLYELLQMESWDEQGFWSVSEQCKDSSVPREPTVDGQMRPCSSNVKEDRSRHQDEGPTTSGENGGTRFDSTNQEPEAVFSVSGQRQNSRKSFISTKIKKMYRKPKSLCKKLFPWSYDWHREESSIDEKILEASGPIRKCKSGVDHNAVLRAMARALEKTEEAYMEMVEHNLDKTPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNPSFLKDDVRHKNRSRESLVRMELDRISEESPIHNQNNHVNKMNKNREISICRLKMRALQLSTDHCTGVEEEVFRIRAEHPDDNQAILNDRVKGHLKVTRAFGAGFLKRVS. 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06862 773 PANTHER PROTEIN PHOSPHATASE 2C 281 770 IPR015655 GO:0004722|GO:0006470
Seca7g06862 773 MobiDBLite consensus disorder prediction 488 502 - -
Seca7g06862 773 SUPERFAMILY PP2C-like 289 770 IPR036457 -
Seca7g06862 773 MobiDBLite consensus disorder prediction 368 392 - -
Seca7g06862 773 MobiDBLite consensus disorder prediction 70 92 - -
Seca7g06862 773 Gene3D - 259 419 IPR036457 -
Seca7g06862 773 Pfam Protein phosphatase 2C 603 665 IPR001932 -
Seca7g06862 773 Pfam Protein phosphatase 2C 713 771 IPR001932 -
Seca7g06862 773 MobiDBLite consensus disorder prediction 469 518 - -
Seca7g06862 773 MobiDBLite consensus disorder prediction 367 392 - -
Seca7g06862 773 FunFam Protein phosphatase 2C 32 254 422 - -
Seca7g06862 773 Gene3D - 514 773 IPR036457 -
Seca7g06862 773 MobiDBLite consensus disorder prediction 503 518 - -
Seca7g06862 773 ProSiteProfiles PPM-type phosphatase domain profile. 277 773 IPR001932 -
Seca7g06862 773 SMART PP2C_4 277 772 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06862 Seca-Chr7 171207157 171210562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06862 1 771 PP2C-type Phosphatase Gene Family AT2G46920 62.003 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06862 - - gmx:100786856 1244.18