Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06861 ATGGATGACACAATCAATGGTAGATTAATCACATTTAAGCTACTGAGGCAAACTTCAAAGAGGGTCCGGTGCAGCATGTTGTTATATTATTGCATTGCATCAGAACATTTTCCAGTTGATCATTACTTGCCATCTTTTAACGAAGCTCTACTGGAGGTGTTTCAAGTTGATTATGTGGGCACTGCTCCTTACCTAAGTTGCACTCCTTCTGTTCTTCATCACCGACTTTCCTCAAGTGATCGGTTCTTGGTACTCTCCTCTGATGGGCTCTACCAATATTTCAGCAATGAAGAAGTTGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCTGATGGTGATCCTGCACAATACCTTATTGCCGAGCTTCTCTTCTGTGCTGCTAAAAAGAATGGTATGGACTTTCATGACTTGCTTGATATTCCTCATGGAGATCGACGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTGGAGGGAAGGATTTGGAGATCATCAGGATAA 510 0.4137 MDDTINGRLITFKLLRQTSKRVRCSMLLYYCIASEHFPVDHYLPSFNEALLEVFQVDYVGTAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPDGDPAQYLIAELLFCAAKKNGMDFHDLLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06861 169 Gene3D - 34 166 IPR036457 -
Seca7g06861 169 PANTHER PROTEIN PHOSPHATASE 2C 55 159 IPR015655 GO:0004722|GO:0006470
Seca7g06861 169 SUPERFAMILY PP2C-like 58 161 IPR036457 -
Seca7g06861 169 ProSiteProfiles PPM-type phosphatase domain profile. 1 160 IPR001932 -
Seca7g06861 169 Pfam Protein phosphatase 2C 60 109 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06861 Seca-Chr7 171204081 171205895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06861 44 169 PP2C-type Phosphatase Gene Family AT2G46920 83.333 1.06e-72 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06861 - - vvi:100262441 244.202