Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06825 ATGGGTGCTGATCTTAAAGCTGATTTGTCCAAGAAAACTCCCATTGCTGGTCTTAAGGTTTGGGAAATAATTGGAATTGCAGTTGGATTGTCTATTATTGTTATCCTCTCTGTGCTCTCATTTTGCCTTACTTCACGGAAGAAATCTAGAAAGGCTAGAGACAAGGTTCCTGTTAGTCAAATACCTACTGTCTCAAAGGAAATCAAAGAAGTAAGGGTTGAGCAAGTACCGGCAAATGGATTTGTTCCCCGTGATGGAATACTTCTTACAATTCATGATAAATCCAGTGACAGAGAATCAGACAAAGTTATGGTTCATTTAGGTGTGGGGAATATGAAGCATGGGGATAGTGGAAGTCACTCAGATTCATTTCATGGAGGTGGGTCACAATCAGGGGAAGAAGGTAGCTCTGGCACGATTAAAGTGTACAAGCCCTCTTCTTCATACCCTATAACAGCTCCTTCACCTCTGTCTGGCCTTCCAGAGTTCTCTCACTTGGGTTGGGGTCACTGGTTTACATTGAGGGATCTTGAACTTGCTACGAATCGTTTTTCAAAAGAAAATGTCCTTGGTGAGGGTGGTTATGGAGTTGTTTACCGGGGAAAGTTGATCAATGGGACTCCAGTGGCAGTTAAAAAGATACTCAACAACATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTCGAAGCTATTGGCCATGTCCGACATAAAAATTTGGTTCGTCTATTGGGGTACTGCATTGAGGGGACTCACAGGTACCCTACCTATCAATTGCATTACAGTCTCAACTATATTTTCAGGATGTTAGTGTATGAGTATGTCAATAATGGAAACTTAGAACAATGGCTTCATGGAGCTATGCGTCATCATGGGTATCTTACTTGGGAAGCACGAATCAAGATTCTTCTTGGCACAGCTAAGGCGCTTGCATATTTGCATGAAGCAATTGAGCCGAAGGTGGTTCACCGAGATATCAAGTCCAGCAACATATTAATTGATGACGACTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTAGGTTCTGGGACAAGTCATGTTGCAACACGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGTCTTTTAAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTGTGCTATTGGAAGCAATTACTGGAAGAGATCCAGTTGACTATGGTCGCCCAGCACAGGAAGTTAATCTGGTTGATTGGTTGAAGATGATGGTTGGAAATAGGCGATCAGAAGAAGTGGTGGACCCAAACATTGAGGTGAAGCCATCAACCAGAGCTTTAAAAAGGACTCTCTTAACTGCTTTAAGATGTGTAGATCCAGATTCGGAGAAAAGACCCAAGATGGGCCAAGTTGCACGTATGCTTGAGTCAGAGGAGTACCCTTTACAGAGAGAGGACCGAAGGCAGCGGAGAAATCGCGGGGTTAACTCAGAAATTGAATCCCAGAATTCTGACACAGACCGGAGTGAGATTCAAGGTTTTAGATCAGAAAGTGAAAGGTAA 1548 0.427 MGADLKADLSKKTPIAGLKVWEIIGIAVGLSIIVILSVLSFCLTSRKKSRKARDKVPVSQIPTVSKEIKEVRVEQVPANGFVPRDGILLTIHDKSSDRESDKVMVHLGVGNMKHGDSGSHSDSFHGGGSQSGEEGSSGTIKVYKPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYRGKLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRYPTYQLHYSLNYIFRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGSGTSHVATRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAQEVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRTLLTALRCVDPDSEKRPKMGQVARMLESEEYPLQREDRRQRRNRGVNSEIESQNSDTDRSEIQGFRSESER. 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06825 515 MobiDBLite consensus disorder prediction 469 490 - -
Seca7g06825 515 Gene3D Phosphorylase Kinase; domain 1 168 274 - -
Seca7g06825 515 MobiDBLite consensus disorder prediction 469 515 - -
Seca7g06825 515 CDD STKc_IRAK 190 471 - -
Seca7g06825 515 PANTHER OS01G0323000 PROTEIN 5 498 - -
Seca7g06825 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
Seca7g06825 515 SUPERFAMILY Protein kinase-like (PK-like) 168 478 IPR011009 -
Seca7g06825 515 MobiDBLite consensus disorder prediction 122 141 - -
Seca7g06825 515 Gene3D Transferase(Phosphotransferase) domain 1 275 488 - -
Seca7g06825 515 Pfam Protein kinase domain 185 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06825 515 FunFam Putative receptor-like serine/threonine-protein kinase 275 486 - -
Seca7g06825 515 FunFam Putative receptor-like protein kinase 166 259 - -
Seca7g06825 515 MobiDBLite consensus disorder prediction 110 141 - -
Seca7g06825 515 ProSitePatterns Protein kinases ATP-binding region signature. 190 213 IPR017441 GO:0005524
Seca7g06825 515 ProSiteProfiles Protein kinase domain profile. 184 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06825 515 SMART serkin_6 184 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06825 Seca-Chr7 170731378 170737251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06825 161 473 Trihelix Transcription Factor Family AT1G70460 48.742 7.58e-89 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Seca7g06825 Pkinase 3.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06825 - - gmx:100778269 844.343