Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06811 ATGGGTTACTTCACACAACATGGTACACCAAATTATATTTCCCCTGAGGTGATCCAGGACAAAGGCTGTGATGGTGCAAAGGCTGATCTCTGGTCATGTGGTGTTATTCTTTTTATTTTAATGGCCGGTTATTTTCCCTTTGAAGATAACAATCTTATGGCTTTATATAAAAAGGTATTCTCACCAAATGTATCTGATGTTACAATTTTCAAGGCTGAGTTCACTTGTCCTCCATGGTTTTCTTCAAAATCAAAGAAACTAATCAATAGAATCCTTGATCCCAATCCTGCAACAAGGGTATCTGAAACCCAGTTAAAGGCATACCCCTTCAATACCAATGAAGGTCCAATCCTTTTATAG 360 0.3778 MGYFTQHGTPNYISPEVIQDKGCDGAKADLWSCGVILFILMAGYFPFEDNNLMALYKKVFSPNVSDVTIFKAEFTCPPWFSSKSKKLINRILDPNPATRVSETQLKAYPFNTNEGPILL. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06811 119 Gene3D Transferase(Phosphotransferase) domain 1 2 117 - -
Seca7g06811 119 SUPERFAMILY Protein kinase-like (PK-like) 4 113 IPR011009 -
Seca7g06811 119 ProSiteProfiles Protein kinase domain profile. 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06811 119 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 106 - -
Seca7g06811 119 Pfam Protein kinase domain 5 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06811 Seca-Chr7 170533515 170535416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06811 5 101 CBL-interacting serine-threonine protein kinases AT1G30270 71.134 1.47e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Seca7g06811 Pkinase 5.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06811 - - pop:18099904 149.058