Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06810 ATGGCCGGTTATTTTCCCTTTGAAGATAACAATCTTATGGCTTTATATAAAAAGATTTTCAAGGCTGAGTTCACTTGTCCTCCATGGTTTTCTTCAAAATCAAAGAAACTAATCAATAGAATCCTTGATCCCAATCCTGCAACACGGATTACAATTGCTGAGGTCATTGAGGATGAGTGGTTCAAGAAGGGGTATGTGCCTCCTAGATTTTCAGAGGCCAATGTTAGTCTTGATGATATAAATGCTATTTTCAGTGAAGCAGATGTGGAGAGGCGAGAAGAGAGACCTGTTGCATCACCTGTGACTATGAATGCCTTTGAGCTTATCTTTACATCTCAGGGCCTCAACCTTGGAAATCTTCTCAGAAGCAGATGTTTGGTCTCTTAG 387 0.4031 MAGYFPFEDNNLMALYKKIFKAEFTCPPWFSSKSKKLINRILDPNPATRITIAEVIEDEWFKKGYVPPRFSEANVSLDDINAIFSEADVERREERPVASPVTMNAFELIFTSQGLNLGNLLRSRCLVS. 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06810 128 Gene3D Transferase(Phosphotransferase) domain 1 1 113 - -
Seca7g06810 128 ProSiteProfiles NAF domain profile. 98 122 IPR018451 GO:0007165
Seca7g06810 128 Pfam NAF domain 100 123 IPR004041 GO:0007165
Seca7g06810 128 SUPERFAMILY Protein kinase-like (PK-like) 2 68 IPR011009 -
Seca7g06810 128 ProSiteProfiles Protein kinase domain profile. 1 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06810 128 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06810 Seca-Chr7 170481076 170485121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06810 1 124 CBL-interacting serine-threonine protein kinases AT1G30270 70.000 2.23e-60 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06810 - - mnt:21394696 190.274