Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06795 ATGGCTCGGAAACCCAAATCCGCCTCTTCCTCTTCCTCTTCCTCCTCCGCTGCCGCCTCAACCTACTTCAAAGCCGGCGCTGCGGTGGAAATCAGCTCCGAAGACGAAGGCTTCCGCGGCTCTTGGTTCACCGGCAGGATCGTCCGCCGAATCGCTGCTGGCAGGTTCATGGTCGAGTACGATAACCTGATGGAGGACGAGGAAGGCACCAAGCGCTTGAGAGAATCCCTGAATCTTCACCAGCTCCGGCCAATTCCCCCGCCGGATACCAACCTGGAATTCAAGTTCGGCCAAGAGGTGGACGCGTTCCACCACGACGGCTGGTGGGAGGGCCACATAGCCGAAGAATTGGGGAATGGCAGGTTCGCGGTGTTTTTCAGAGTCTCCAAGGAGCAGATCAATTTTTCGAAGGAGGATCTCAGGGTCCACCGCGAGTGGTTGAATGACGAATGGATCCCCCCAATTGAACAACAACAACAAGAACAACAGGAGAATGAATTGGAGGAAACGTTGTTGACACCAAATGTGAAGCCTGTTGAAACTGGGGCGGAAAAGAAGGAGGAGTTTAGCGTGGGGGCACTGGTTGAGGTTAGCAGTGACGACGATGGTTTCCGAGGAGCTTGGTTTTCTGCCACCATTGTTGAGGCAAGGGGAAAGGAGAAGTTCCTTGTTGAGTACCACAGCCTTCTGGCTGATGATGGTTCTTCTCTTTTAAAAGAGGAGGTTGATATCCTGCACATGAGGCCTCAACCGCCAGAAAAGGGTGCTGTTGGTCAGTTTAATCATCTTGATGAAGTTGATGCTTTGTACAATGACGGCTGGTGGGTTGGTGTGGTTTCTAAAGTTATTGGCAACTCGAGGTATATAGTTTTCTTCAGGAACAGCAATGAAGAGCTAGAGTTTGAGCACTCCCAGTTGAGGCTACACCAGGACTGGATTGATGGCAAATGGGTCATGGCTTCTGAGGTATGGCTGCATCCTTATTTATTTTTCAACTATACACATTGGAACTTCATTTTGAAACTAGTCTTGATTCACATAAAAAAAATGTGGTAA 1056 0.5 MARKPKSASSSSSSSSAAASTYFKAGAAVEISSEDEGFRGSWFTGRIVRRIAAGRFMVEYDNLMEDEEGTKRLRESLNLHQLRPIPPPDTNLEFKFGQEVDAFHHDGWWEGHIAEELGNGRFAVFFRVSKEQINFSKEDLRVHREWLNDEWIPPIEQQQQEQQENELEETLLTPNVKPVETGAEKKEEFSVGALVEVSSDDDGFRGAWFSATIVEARGKEKFLVEYHSLLADDGSSLLKEEVDILHMRPQPPEKGAVGQFNHLDEVDALYNDGWWVGVVSKVIGNSRYIVFFRNSNEELEFEHSQLRLHQDWIDGKWVMASEVWLHPYLFFNYTHWNFILKLVLIHIKKMW. 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06795 351 Pfam Agenet domain 192 252 IPR008395 -
Seca7g06795 351 Pfam Agenet domain 264 318 IPR008395 -
Seca7g06795 351 Pfam Agenet domain 26 87 IPR008395 -
Seca7g06795 351 CDD Tudor_Agenet_AtDUF_rpt2_4 263 308 - -
Seca7g06795 351 CDD Tudor_Agenet_AtDUF_rpt1_3 189 252 - -
Seca7g06795 351 SMART agenet_At_2 187 255 IPR014002 -
Seca7g06795 351 SMART agenet_At_2 258 314 IPR014002 -
Seca7g06795 351 SMART agenet_At_2 92 148 IPR014002 -
Seca7g06795 351 SMART agenet_At_2 21 90 IPR014002 -
Seca7g06795 351 Gene3D - 176 260 - -
Seca7g06795 351 CDD Tudor_Agenet_AtDUF_rpt2_4 97 142 - -
Seca7g06795 351 CDD Tudor_Agenet_AtDUF_rpt1_3 23 87 - -
Seca7g06795 351 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 184 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06795 Seca-Chr7 170366363 170367576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06795 199 351 PHD Transcription Factor Family AT5G58610 27.778 3.02e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06795 - - aprc:113871596 436.802