Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06792 ATGTCCGACAACAAAGGCATAGACCAATACGGTGTTCTCCTCTATTACAAGTACGCTGAGATTCCGAACCTCGACGACCTCTCCACATTCTACCACTCCAACTGCTCCTCCCTCGGCCTCCTCGGTCGTGTTCGCCTTTCTTCTCACGGCGTCAATGTCACCGTTGGCGGCAACTTATCCTCTCTGGAGAGACACATTGAAGCCGTCAAGGCAAACAATAGCTTATTTGAAGGCACTGATTTCAAGCTTGCAACTTGTCATCAGCCACTGAATGACCAGGTTGCCAAGGAGTGTGGATTTACTTCTCTCTCAATTCGGATCGTTGAGGAACTGGTTACTCTCAGTTCTCATCCACTATTAAAGTCACCACAAATCTCAAATGCTGGAAGACATCTCTCTGCACTGGAGTTCCATTCTTCCATTCAGCATGCTAACAAGGAGAGTCCAGAAAACAGCCTGGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAATTTCAGGCACCAAATGTTGAAACTTTGGATCCACAAGTCAGGCAGTATAGTGATTTTTCCTCATGGATAGATGATAATGGTGAGCAGTTGAAAGGCAAAAATATCCTCATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCAGCCTATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTCCAGTTATTTGGTGGTATACAACGGTATCTGGAGCAATTTCCAGATGGTGGCTTTTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGTATGTCTTTTTATTTCACACATGTCTTTTAGGTAGGATTTGTATGAATATCTCGATATCAGTTGGAAGCTCAGATGCTAATATTATTGGTACCTGCCTTATTTGTCACTGCTCATTTGATGATTACTCTTCACGCTGCCGATGTACTTGTTGCAGAATGCTTGTCTTGGTTTGTCAGAGTTGTCAGGATGAATCTGCACAGTATGTTTGTGAGCTATGCCAAAAACAGGACAAGGCGGTTAGGTCACAGCAGTTAGTTGAAAATGGTGAATCAAAACCATCAGTGCCAGGTGTTGAGTTCCATAATTTTTCTTCAGATACTATATTCTTGCCTCAAGTGCCTAGAGGAGATGATGTAAGGACCTCAAGGAAACTGAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCATCTGGTTTTAAGGGAAGAACAGCATCATTAGCCAAAAAACTCAAAAAATTTACTGAATTTGTTTTTATAGACGCACCTCATGAATTGTCATTCATTTATCAAACCCCCATGTCAGAGCCCCATGTGGATTGTGCACCGTCATCATTGCCACCTAGTCCTCTTCCACCGTCGGAGAATTGCAAGAAAAAGTTTGCATGGTTTGTGGCGCCTAATTTTAATGGAAGTAATGATGTTGATTGGAAGGTAGCAGATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGCTGGATATGATATTTCACTATCACACTTGATGAATGTGTTCTCCCAAGAAGGGCCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAATCTCTGCACAACAAGAAAAGCTAAAAGGTAAAATGGATTTTAAATTTGTAGTCTTGTGCTCAGGCTTTGCTCTCCATATGAAGGAAATGGAGCGTGGTCCTATCAAGTGCCCTTCTCTTCATATTTTCGGTAACGAACATGGTAAAGACAGACAGATAGCCAACCAAGCAAGCAAGGAACTTGCTTCACTATATGATGCCGGTTGTTCTGTGATCATTGAACATGATTGTGGTCATATAATTCCTACTCGGTCCCCATGTATTGATGAGATCAAGGATTTCCTTGGGCGTTTTCTGTAA 1884 0.423 MSDNKGIDQYGVLLYYKYAEIPNLDDLSTFYHSNCSSLGLLGRVRLSSHGVNVTVGGNLSSLERHIEAVKANNSLFEGTDFKLATCHQPLNDQVAKECGFTSLSIRIVEELVTLSSHPLLKSPQISNAGRHLSALEFHSSIQHANKESPENSLVLLDARNLYETRIGKFQAPNVETLDPQVRQYSDFSSWIDDNGEQLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRYVFLFHTCLLGRICMNISISVGSSDANIIGTCLICHCSFDDYSSRCRCTCCRMLVLVCQSCQDESAQYVCELCQKQDKAVRSQQLVENGESKPSVPGVEFHNFSSDTIFLPQVPRGDDVRTSRKLRILCLHGFRQNASGFKGRTASLAKKLKKFTEFVFIDAPHELSFIYQTPMSEPHVDCAPSSLPPSPLPPSENCKKKFAWFVAPNFNGSNDVDWKVADGPFDPLQYQQQTAGYDISLSHLMNVFSQEGPFDGILGFSQGAAMAALISAQQEKLKGKMDFKFVVLCSGFALHMKEMERGPIKCPSLHIFGNEHGKDRQIANQASKELASLYDAGCSVIIEHDCGHIIPTRSPCIDEIKDFLGRFL. 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06792 627 Gene3D - 2 112 - -
Seca7g06792 627 SUPERFAMILY alpha/beta-Hydrolases 373 627 IPR029058 -
Seca7g06792 627 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Seca7g06792 627 Gene3D - 121 267 IPR036873 -
Seca7g06792 627 FunFam Rhodanese-like domain-containing protein 6 2 112 - -
Seca7g06792 627 Pfam Rhodanase C-terminal 251 334 IPR022111 -
Seca7g06792 627 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 7 626 IPR020936 -
Seca7g06792 627 CDD RHOD_YceA 129 242 - -
Seca7g06792 627 SMART rhod_4 139 246 IPR001763 -
Seca7g06792 627 FunFam esterase OVCA2 isoform X6 381 627 - -
Seca7g06792 627 Gene3D alpha/beta hydrolase 381 627 IPR029058 -
Seca7g06792 627 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 295 - -
Seca7g06792 627 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Seca7g06792 627 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 124 261 IPR036873 -
Seca7g06792 627 Pfam Serine hydrolase (FSH1) 383 618 IPR005645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06792 Seca-Chr7 170324561 170330979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06792 8 627 Sulfurtransferasese or Rhodanese AT1G09280 62.179 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06792 - - mtr:25484701 1052.74