Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06789 ATGGAATCATTCGAACCAAACATAGGTTCCAGTAATTCAGACACGTTGCAAGAATCCAATCACAATAAGCGCCGGAAAATCGGAGACCACGACGCCGGCGATCAAAATTCCCTCAATCTCATGCCGTGGAGATCCGACACCGAGCAGCAGATCTACTCCCGCAAGCTCGTCGAAGCTCTCCGCCGGATTCCTTCCCCGGCGGCGACTAAGCCTAGAGTCGCCGGTCAAGTCCGGGAGACCGCCGACCGAGTCCTCGCCGCCACCGCCAAGGGAAGAACGCGGTGGAGCCGCGCGATTCTCGGCCGGTGGAAGAAGCTCCAGAGGCAGCAGCACAAGAAAGTGAAAAAGGCCGGCACCGCTGCCGGATTGAAGCGACGACCGGGAATCAGCGGCGAGAGGAGGCGGCGGTTACCGGCGGTGCAGAAGAAAGCGCGCGTTCTCAGCCGGTTGGTTCCTGGTTGCCGGAAGCTTTCGTTCCCGAACCTTCTGGAAGAAGCCACCGACTATATCTCCGCCTTGGAGATGCAGGTGCGAGCCATGACGACTCTCGCCGAACTACTCGCCGGTGGCGCGCCGGCTGGACTCGCTGGTCACGTGTTGAGTTGA 606 0.6023 MESFEPNIGSSNSDTLQESNHNKRRKIGDHDAGDQNSLNLMPWRSDTEQQIYSRKLVEALRRIPSPAATKPRVAGQVRETADRVLAATAKGRTRWSRAILGRWKKLQRQQHKKVKKAGTAAGLKRRPGISGERRRRLPAVQKKARVLSRLVPGCRKLSFPNLLEEATDYISALEMQVRAMTTLAELLAGGAPAGLAGHVLS. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06789 201 MobiDBLite consensus disorder prediction 113 135 - -
Seca7g06789 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 190 IPR036638 GO:0046983
Seca7g06789 201 MobiDBLite consensus disorder prediction 1 17 - -
Seca7g06789 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Seca7g06789 201 MobiDBLite consensus disorder prediction 18 32 - -
Seca7g06789 201 CDD bHLH_AtIBH1_like 132 184 IPR044549 GO:0006355
Seca7g06789 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 187 IPR044660 GO:0006355
Seca7g06789 201 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06789 Seca-Chr7 170294803 170295408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06789 1 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.845 4.85e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06789 - - gmx:100783462 277.715