Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06774 ATGGGTGAGTTCAGTGAGGTTCTTACACAAATTCTGATACCTGTGGCTGCAGTAATTGGGATTGGGTATGCGTTGCTTCAATGGCTTTTAGTCTCGAGGGTCAGGGTCTCTGCAGCTGCTGATCACACTGATGCAGACAACGGATATAAAAAAAGCTTAATTGGAGATTCAGAGTTGGAGAATGGTGTTCAGGGTCTTGATGTTACCATTAAGTGTGCTGAAATCCAGCAAGCTATTTCTGTTGGAGCTACTTCGTTTCTGTTTACCGAGTATAGGTACCTAACTATCTTCATGGGAGTATTTGGTGCAATAATTTTCCTCTTTCTAGGCTCTGTGAAGGGCTTTAGTACCAAGAGTGAACCTTGCACTTATAATGAAGGCAATCTTTGTAAACCAGCACTTGCTAATGCCCTCTTCAGCACTGTTGCCTTCTTGCTTGGTGCTCTAACCTCTGTCCTTTCTGGCTTTCTTGGGATGAAGATTGCAACCTATGCCAATGCTAGAACAACTCTTGAAGCAAGGAAAGGAGTAGGAAAGGCATTTGTTACTGCTTTTCGCTCTGGTGCAGTGATGGGCTTTCTGCTTGCTGCAAATGGCCTGTTGGTGCTATACATCTCCATCAATTTATTCAAACTGTATTATGGAGATGACTGGGAGGGACTTTATGAGTCTATTACTGGCTATGGGCTTGGAGGTTCGTCAATGGCACTCTTTGGAAGAGTTGGAGGAGGTATATACACCAAAGCTGCTGATGTTGGTGCTGACCTTGTAGGGAAAGTTGAACACAATATCCCTGAAGATGATCCACGCAACCCAGCTGTTATTGCAGACAATGTAGGAGACAACGTTGGAGATATTGCTGGGATGGGTTCTGACTTATTTGGGTCTTATGCAGAATCATCATGTGCAGCTTTATTTGTTGCATCCATATCATCGTTTGGATTGAATCATGATTACACAGCCATGTCATATCCTCTCATCATAAGCTCAATGGGAATTGTGGTTTGCTTGATTACAACTCTTTTTGCAACTGATATGTTCGAAATAAAAGATGTGACCCAAATAGAACCAACCCTGAAAAGACAGCTTCTTATCTCCACTATCTTAATGACTGCTGGTATTGCCATAGTGAGCTTCTTTGCTTTGCCATCAGAATTTACTATCTATAATTTCGGAGGCAATAAGGTTGTTAAGAACTGGCACCTTTTCTTCTGTGTTGCAATTGGCTTATGGGCTGGACTTGTAATTGGGTACATTACTGAATACTACACTAGCAGTGCTTACAGACTTCCTTTTCATATTTTGTTTGTAAATTGCAGTCCAGTGCAAGATGTGGCAGATTCCTGCAGAACTGGAGCTGCAACAAATGTGATTTTTGGATTGGCACTGGGATATAAATCAGTCATTATTCCAATATTTGCCATTGCTGTTGCTATTTATGTAAGCTTCAGCCTTGCCGCCATGTATGGAATTGCAGTTGCAGCGCTTGGAATGCTCAGTACCATTGCCACTAGTCTTGCCATTGATGCTTATGGTCCCATTAGTGATAATGCTGGAGGTATTGCAGAAATGGCTGGAATGAGACATGAGATACGAGAAAGAACAGATGCTTTGGATGCTGCAGGAAACACCACAGCCGCTATAGGCAAGGGTTTTGCTATTGGATCAGCTGCACTCGTGTCTCTTGCATTGTTTGGTGCTTATGTGAGCAGAGCAGGCATCAAAACAGTGAATGTGCTGACCCCAAAAGTTTTTATTGGTTTGATTGTGGGAGCAATGCTTCCCTATTGGTTTTCAGCCATGACAATGAAGAGTGTTGGGAGTGCAGCTCTCAAAATGGTTGAAGAAGTTCGTAGGCAATTCAATACTATTCCAGGTCTTATAGAAGGAAGAGCAAAACCAGATTATGCTACTTGTGTAAAGATTTCCACTGACGCCTCACTTAGGGAGATGATCCCACCTGGTGCATTGGTTTTGCTTACACCACTTGTTGCCGGAACATTCTTTGGGGTAGAGACTCTTGCTGGGGTTCTTGCTGGCTCTCTTGTTTCCGGTGTGCAGGTGGCAATTTCAGCTTCAAACACTGGTGGTGCATGGGATAACGCCAAGAAATACATAGAGGCTGGTGCTACCCCTCATGCTGTATCACTGGGTCCAAAAGGCTCAGACGCTCACAAGGCAGCTGTCATAGGTGACACTGTTGGAGACCCTCTCAAGGACACTTCTGGTCCCTCACTCAACATCTTGATCAAGCTGATGGCAGTTGAATCATTGGTATTTGCTCCATTCTTCGCTGCTCACGGAGGCTTAATCTTTAAATTACTCTGA 2328 0.436 MGEFSEVLTQILIPVAAVIGIGYALLQWLLVSRVRVSAAADHTDADNGYKKSLIGDSELENGVQGLDVTIKCAEIQQAISVGATSFLFTEYRYLTIFMGVFGAIIFLFLGSVKGFSTKSEPCTYNEGNLCKPALANALFSTVAFLLGALTSVLSGFLGMKIATYANARTTLEARKGVGKAFVTAFRSGAVMGFLLAANGLLVLYISINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVEHNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALFVASISSFGLNHDYTAMSYPLIISSMGIVVCLITTLFATDMFEIKDVTQIEPTLKRQLLISTILMTAGIAIVSFFALPSEFTIYNFGGNKVVKNWHLFFCVAIGLWAGLVIGYITEYYTSSAYRLPFHILFVNCSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVAIYVSFSLAAMYGIAVAALGMLSTIATSLAIDAYGPISDNAGGIAEMAGMRHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAYVSRAGIKTVNVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLIEGRAKPDYATCVKISTDASLREMIPPGALVLLTPLVAGTFFGVETLAGVLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGATPHAVSLGPKGSDAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFKLL. 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06774 775 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 5 765 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca7g06774 775 Pfam Inorganic H+ pyrophosphatase 70 760 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca7g06774 775 PIRSF H+-PPtase 12 773 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca7g06774 775 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 765 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca7g06774 775 NCBIfam V-type H(+)-translocating pyrophosphatase 8 770 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06774 Seca-Chr7 170131430 170135635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06774 6 638 Primary Pumps ATPases AT1G15690 78.560 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06774 K23025 - gmx:100812548 1389.79