LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g06762	ATGGGATCATCACATAGGCAATCTCGCGAGGAGCATGGGGGTGATGACAGACGTCATAGAATTCCAATTCAGGAATCTAAACAGAAACATAGTGATCCAAAACAAGCAGCTTTTAGTGGCCTTGGAAATGTGCTAAAAGGGTTGTGGAGCAATGACCTTGAATTATACTTTGAACGTTTCCTGCGAAGAGTGGTACGAGAGGAGGTGGAACGCAAAATCCAGGATTACCTATGTACAAGTTGCAGAGCAACGGCTAATCAAGCTGGCATATCTAGAGTCACACCCTTTCAGTTGCGTTTCATGAGTAAATTGGCTGATACAATTTTCACACACACTGACATCATAGCAGAGGATAACACACCCATTCAAATTGCTCTCTTTGATGTTAGATCTCAGACAATTGTTAATGTTGGCCCCCTCTCATGTATAAAGATAGAGATCTGTGCCCTCAATGGTGAGTTCAGCTTCAATGACAATGAGGATTGGACTGAAGATGAATTCAATGCCAATATCTTGCGTGAGAGGGATGGTAAAAGGCCATTACTGAATGGAGATAGGTTTATTGCTCTAAAAAATGGAGTAGGTTGTATCAATAAACTTATGTTCACAGATAACTCAAGATGGATAAGAAGCAGAAAGTTTAGGTTGGGAGCCAAAGTTGTGCAACCAATTTCAAATGAAGCAAGCATTAAGGAAGGTAGAAGTGAACCTTTTGTGGTCAAAGATTACAGAGGAGAGTCTTACAAGAAACACTATCCTCCTTCCTTGAATGATGACGTTTGGCGTTTGGAGCAAATTGCCAAAGATGGAAAGATCCACAAGCGGTTGTCTTTCCATGGAATTCACACTGTCCAGGATCTCTTGCGGTTATACACAACAAATCAATCTTCATTATATGAGAAGGTTGGCAACATTCCGAAGAGGTCATGGCTAGCAATTATTGAACATGCCAAGACTTGTGTGATAGATGATGACAAGCCTTATGTCTACCGAACAGCAGAACAACCAGTAGGCCTGCTTTTCAATTCCATCTATGTCCTTGTAGGAGTGACATTTGATGGCCAAAATTATTGCTCTCCTGATATTCTCAACCCTAATGAAAAGCATTTGGTGGAAATAATGAAGCAGCATGCTTACAAAAATGTGAATAATTTGAAGCCAATTGATGATACATCATTGATCTGCTTAAGACCATTGACAAGTCTAGGAGAAGGGCAGTCCAATGCTACACATCAAGTCTTCAACAATTTAATATCTCTACAGTAA	1266	0.4036	MGSSHRQSREEHGGDDRRHRIPIQESKQKHSDPKQAAFSGLGNVLKGLWSNDLELYFERFLRRVVREEVERKIQDYLCTSCRATANQAGISRVTPFQLRFMSKLADTIFTHTDIIAEDNTPIQIALFDVRSQTIVNVGPLSCIKIEICALNGEFSFNDNEDWTEDEFNANILRERDGKRPLLNGDRFIALKNGVGCINKLMFTDNSRWIRSRKFRLGAKVVQPISNEASIKEGRSEPFVVKDYRGESYKKHYPPSLNDDVWRLEQIAKDGKIHKRLSFHGIHTVQDLLRLYTTNQSSLYEKVGNIPKRSWLAIIEHAKTCVIDDDKPYVYRTAEQPVGLLFNSIYVLVGVTFDGQNYCSPDILNPNEKHLVEIMKQHAYKNVNNLKPIDDTSLICLRPLTSLGEGQSNATHQVFNNLISLQ.	422

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g06762	421	PANTHER	OS02G0177800 PROTEIN	28	406	IPR012416	GO:0005516
	Seca7g06762	421	Pfam	Calmodulin binding protein C-terminal domain	328	387	IPR046829	-
	Seca7g06762	421	Pfam	Calmodulin binding protein central domain	255	320	IPR046830	-
	Seca7g06762	421	MobiDBLite	consensus disorder prediction	1	35	-	-
	Seca7g06762	421	MobiDBLite	consensus disorder prediction	1	32	-	-
	Seca7g06762	421	Pfam	Calmodulin binding protein-like N-terminal domain	96	242	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g06762	Seca-Chr7	170008301	170011563	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca7g06762	57	396	Calmodulin-binding Proteins	AT4G25800	43.064	9.11e-89	279

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g06762	-		-	gmx:100806598	610.912