Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06758 ATGGCGACGAGGAATCGCACTTTGCTTTTCCGAAAACACAGAGATGCATTGAAGAGTGTTCGCGTTCCGTCCTCCTCTTCGCCGTCGTCCACCGCTTCCGCCGGTGGCCCCGTCATCGAATTGGTCAGCACCTCGCTTCTCAACCCCAATCGCTCTTACGCTCCGCTTAGTACTGAAGATCCCGGCAGTAAGGGTCCAAATCCAATTACTGTGGGGTTACCTCCAGCGTGGGTTGATTTATCTGAAGAAATATCAGCAGATGTGCAACGTGCGCGCACAAAAATGGCAGAGTTGGCTAAGGCTCATGCAAAGGCTTTAATGCCATCATTTGGAGATGGTAAGGAAGACCAACGTGCTATTGAGACTCTAACACACGAGGTAACTGACTTAATCAAGAGATCAGAGAGGAGACTGCGGAGACTTTCTGCTGCTGGGCCTTCTGAGGATTCCAATGTCAGGAAAAATGTCCAGCGTTCTCTTGCTACTGACCTTCAGAACCTCTCTGTAGAGCTTCGCAAGAAACAATCAACTTATTTGAAGCGCCTCAGGCTGCAAAAAGAGGTGAGGGAAAAGCTCTTTTTTTTTTTACATTTTCTTTCCTTGATTAACAAAGAAAATAAAATTTGCAATTTTTTCAGGGGTTTATATTTTTACTGGCATGGTTTACTTATAGCAACAATTAAACCACAAAAGTAA 696 0.4526 MATRNRTLLFRKHRDALKSVRVPSSSSPSSTASAGGPVIELVSTSLLNPNRSYAPLSTEDPGSKGPNPITVGLPPAWVDLSEEISADVQRARTKMAELAKAHAKALMPSFGDGKEDQRAIETLTHEVTDLIKRSERRLRRLSAAGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSTYLKRLRLQKEVREKLFFFLHFLSLINKENKICNFFRGLYFYWHGLLIATIKPQK. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06758 231 Coils Coil 81 101 - -
Seca7g06758 231 SMART SynN_4 68 183 IPR006011 GO:0016020
Seca7g06758 231 Gene3D - 74 194 - -
Seca7g06758 231 SUPERFAMILY t-snare proteins 72 191 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06758 Seca-Chr7 169969844 169973958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06758 1 187 SNARE and Associated Proteins AT3G05710 77.157 1.10e-102 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06758 K08489 - gmx:100796741 309.301