Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06755 ATGCCTACTAGCAAAGGATCGTTCAGCTCAACTGCGAACACAAGAAACAGAATTTGCCCATGCGGTGACAATATGTTGCTCCTTACTTCAACCAGCTACAAAAATCCAGGTAGAAGGTTCTGGCGTTGCCCAAATTGGATGAAACAGGGTACTTGTAACTATTTCGAATGGATGGATGATGACTATGGACAACCTTCAACATCTCATTGTAAACAATGTTCAGACATGGTGCTGCAAACATGGACATTGAAGGTATCAAAGTTGGAAAGGAAACTTCAGACTCAAAGAAGACATAAAAAAATCATCCTTGCTCTGCTTCTATTATCCTTCACCATTAATGTTATCCTTACTATCCTCTTCAGTGAAAATGGTGAATGTAATGCATGA 387 0.3953 MPTSKGSFSSTANTRNRICPCGDNMLLLTSTSYKNPGRRFWRCPNWMKQGTCNYFEWMDDDYGQPSTSHCKQCSDMVLQTWTLKVSKLERKLQTQRRHKKIILALLLLSFTINVILTILFSENGECNA. 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06755 128 ProSiteProfiles Zinc finger GRF-type profile. 19 61 IPR010666 GO:0008270
Seca7g06755 128 PANTHER ZINC ION-BINDING PROTEIN 9 98 - -
Seca7g06755 128 Pfam GRF zinc finger 18 60 IPR010666 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06755 Seca-Chr7 169925241 169925921 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Seca7g06755 zf-GRF 1.9e-11 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06755 - - vun:114179678 85.8853