Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06744 ATGGGGCATTTTTCATCTATGTTCAATGGGTTGGCAAAATCATTTGCAATGAAGAAGGGGAAGAATTCTGGTAGATGTAGCGGGAGAGAAGCTGCAGAAGCAATGGCAAAGGAAGCTAAAAAGAATCACTCCATGCTGCATAGCTCAGGCACTGTTAATGTTGATGGTTCAAACAATTTTGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAGTGAATCAGGATTGCTGCGTAGTGTGGGAAGAATTTGGATGCCAAGAGGACATGATCTTCTGTGGGATTTTTGATGGACATGGACCATGGGGTCACTTTGTGGCCAGAAGAGTAAGAGAATCATTGCCACCCTCTTTGCTATGCAACTGGCAAGAGACTCTTTCCCAAAATTCACTTGATCCTGATATTGATATAGAGACAGAGAAAAAGCATCACCGGTTTAATATATGGAAGCATTCCTACTTGAAGACTTGTGCTGTCATTGATCAAGAACTACAACAGAATCGCAAGATAGATTCATTTTTCAGTGGAACAACTGCCCTATCAATTGTTAGACAGGGTGAACTCATTGTGATTGCAAATGTTGGTGACTCTCGTGCTGTATTAGCCACAACATCAGATGATGGAAATTTGGTATCAGTTCAGCTGACAGTAGATTTCAAGCCCAATTTACCACAGGAGGCAGAGCGAATACTTGAGTGTCAAGGGAGGGTGTTCTGCTTACACGATGAGCCAGGAGTGCACAGGGTTTGGTTGCCAGATGAGGAGTCCCCAGGATTGGCCATGTCTAGAGCTTTTGGTGACTATTGTGTGAAAGAATATGGTCTTATTTCAGTGCCTGAGGTAACACAAAGGAATATAACCAATAGAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAATCTCGAATCAAGAAGCGGTGGATATTGTGTCTTCAACAGCAGACAGAACAAATTCAGCTAAACGTTTGGTGGAGTGTGCAATGCATGCATGGAAACGCAAGAGGCGAGGTATTGCCATGGATGACATTTCAGCTATTTGTCTCTTTTTTCACTCATCTTCACCTGAGCAAGTTGTTGCTACCCTAAAATAG 1098 0.4317 MGHFSSMFNGLAKSFAMKKGKNSGRCSGREAAEAMAKEAKKNHSMLHSSGTVNVDGSNNFASVFSKRGKKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVARRVRESLPPSLLCNWQETLSQNSLDPDIDIETEKKHHRFNIWKHSYLKTCAVIDQELQQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGNLVSVQLTVDFKPNLPQEAERILECQGRVFCLHDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNITNRDQFVVLATDGVWDVISNQEAVDIVSSTADRTNSAKRLVECAMHAWKRKRRGIAMDDISAICLFFHSSSPEQVVATLK. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06744 365 SUPERFAMILY PP2C-like 59 353 IPR036457 -
Seca7g06744 365 Pfam Protein phosphatase 2C 84 327 IPR001932 -
Seca7g06744 365 Gene3D - 27 355 IPR036457 -
Seca7g06744 365 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Seca7g06744 365 CDD PP2Cc 59 352 IPR001932 -
Seca7g06744 365 SMART PP2C_4 51 350 IPR001932 -
Seca7g06744 365 PANTHER PROTEIN PHOSPHATASE 42 350 IPR015655 GO:0004722|GO:0006470
Seca7g06744 365 FunFam Probable protein phosphatase 2C 34 51 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06744 Seca-Chr7 169834692 169838645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06744 1 353 PP2C-type Phosphatase Gene Family AT3G05640 72.113 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06744 - - gmx:100793051 646.351