Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06735 ATGTCTGGGGGAGATGCAGAGAGGGGAAAGAGCATCGTCATCATTGGCCTATCTTCCTTGTTACTAGTGGCCATGATCGTTGCCGTCACTATTGGTCTTAACGAAAATGAGAATAGTTCCGATGGTGATAATTTAGAGGACAACAGGAAGCACCACATCGTTTCAACCGTATCAGCAATTCAAACCCTTTGCCATCCCACCGATTACAAGAAGGAATGTGAGGAAAGCCTCATAGCAGAGGCTGGCGACACCACAGACCCAAAAGAATTGATCAAAATCGCCTTTAACGTTACCATTAAGAAAATTGGTGACAAACTCAAGGAAACAGAGCTCTTGCAAGAGGTTGAGAAGGAACCAAGAGCCAAGATGGCACTTGACACGTGCAAGCAACTGATGGATCTTTCAATTGAGGAATTCAAGAGGTCACTTGATGAAATAGGTCAATTTGATCTCACAAATCTTGACAAGATTCTCATGAATTTAAAGGTTTGGCTAAGCGGTGCAGTGACATACCAAGATACATGCTTGGATGGGTTTGAGAACACCACGAGCGAAGCAAGTGCAAAGATGAAGGACCTATTAACAACAGGCATGCACATGAGTAGCAATGCCCTTGCCATTGTTTCTGATTTTGCTGACACTGTCTCAGATTGGAATGTCACAAAGTTATTTGGGCGTCGCCTCCTTCAAGATTCTGAGAAGACTCCTTCTTGGGTTGATGAACAAACTCTCCTTGATACAAACACAAGTACATTCCAGCATAAGCCTAATTTGACTGTGGCCATAGATGGTAGTGGAGATTTCAAGAGCATCAATGAGGCATTGAAGCATGTGCCTGAGGACAATGAAGAGCCATTTGTCATATACATCAAGGAAGGCATTTACCAAGAGTATGTTGAAGTTACCAAGCAAATGACCTATGTGGTGTTTGTTGGTGATGGTGGCCAAAAGACAAGAATCACTGGCAACAAAAACTTCATAGATGGGATTAACACCTACAGAACCGCTACAGTTGCAATTCAAGGAGATCATTTTGTTGCTAGGAATATGGGTTTTGAGAACTCAGCTGGGCCCCACAAGCATCAAGCAGTGGCATTGAGGGTTCAAGGAGACAAGTCCATCTTCTTCAATTGCTCAATGGATGGATATCAGGACACACTTTATGTACACACCATGCGTCAATTCTACAGAGATTGCACTATTTCAGGTACCATTGACTTCGTCTTTGGTAATGCGCTGTCTGTTTTCCAGAACTGCACTTTTGTGGTTCGGAAGCCATTGAAAAATCAACAATGCATTGTGACGGCACAAGGAAGGAAAGAAAGGCAACAACCATCAGGAATAGTGATCCAAGGAGGATCCATTGTGTCTGATCCTCTGTTCTATGCAGTGAGGTTTGAGAATAAGGCGTACCTTGCTCGTCCGTGGAAGAATTTCTCAAGGACCGTCTTCATGGATACATACATTGACGATTTGATTCATCCTGATGGATATTTGCCATGGCAAGGAGAAGAGGGTCCTTCTGGTATGAACACTTGCTTTTATGCCGAGTACCATAACACTGGTCCCGGTTCTAATAAATCCAAGCGTGTCAATTGGGCTGGGATATGGAACCTCAATTCAAAAGCTGCAAACTCTTTCTCACCATCCAAGTTCTTTCATGGGGATGACTGGATTGAGGTTACTGGGATTCCTTACTTTCCTGGTGTTCCCACTCACCATAGGCACAAAAAGACAATACTTAGTTGGTGA 1752 0.4349 MSGGDAERGKSIVIIGLSSLLLVAMIVAVTIGLNENENSSDGDNLEDNRKHHIVSTVSAIQTLCHPTDYKKECEESLIAEAGDTTDPKELIKIAFNVTIKKIGDKLKETELLQEVEKEPRAKMALDTCKQLMDLSIEEFKRSLDEIGQFDLTNLDKILMNLKVWLSGAVTYQDTCLDGFENTTSEASAKMKDLLTTGMHMSSNALAIVSDFADTVSDWNVTKLFGRRLLQDSEKTPSWVDEQTLLDTNTSTFQHKPNLTVAIDGSGDFKSINEALKHVPEDNEEPFVIYIKEGIYQEYVEVTKQMTYVVFVGDGGQKTRITGNKNFIDGINTYRTATVAIQGDHFVARNMGFENSAGPHKHQAVALRVQGDKSIFFNCSMDGYQDTLYVHTMRQFYRDCTISGTIDFVFGNALSVFQNCTFVVRKPLKNQQCIVTAQGRKERQQPSGIVIQGGSIVSDPLFYAVRFENKAYLARPWKNFSRTVFMDTYIDDLIHPDGYLPWQGEEGPSGMNTCFYAEYHNTGPGSNKSKRVNWAGIWNLNSKAANSFSPSKFFHGDDWIEVTGIPYFPGVPTHHRHKKTILSW. 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06735 583 Pfam Pectinesterase 257 556 IPR000070 GO:0030599|GO:0042545
Seca7g06735 583 NCBIfam pectinesterase inhibitor domain 56 208 IPR006501 GO:0004857
Seca7g06735 583 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 211 IPR035513 -
Seca7g06735 583 PANTHER PECTINESTERASE 18 560 - -
Seca7g06735 583 SMART PMEI_2 55 207 IPR006501 GO:0004857
Seca7g06735 583 FunFam Pectinesterase 56 212 - -
Seca7g06735 583 SUPERFAMILY Pectin lyase-like 252 569 IPR011050 -
Seca7g06735 583 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Seca7g06735 583 CDD PMEI-like_3 62 212 - -
Seca7g06735 583 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Seca7g06735 583 Gene3D - 251 570 IPR012334 -
Seca7g06735 583 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 211 IPR035513 -
Seca7g06735 583 Pfam Plant invertase/pectin methylesterase inhibitor 59 207 IPR006501 GO:0004857
Seca7g06735 583 FunFam Pectinesterase 251 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06735 Seca-Chr7 169741897 169744136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06735 5 570 Carbohydrate Esterase AT3G05610 49.472 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06735 K01051 - gmx:100803527 989.564