Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06724 ATGAGTCGAGGAGGTGCAGCTGGTGCCAAAGGGAAGAAGAAGGGTGTGACATTCACCATTGACTGCGCCAAGCCAGTGGAGGACAAGATCATGGACATTGCATCTCTCGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGTAAGGCCGGTGCTCTCGGCGACACTGTCTCTGTTACACGCGAGAAGACCAAGATCATTGTCACTTCTGACAGCAACTTCTCCAAACGGGTATCTGAAGTACTTGACAAAGAAGTACTTGAAGAAACACAATGTACGGGACTGGCTCAGAGTGATTGCTTCTAA 306 0.4869 MSRGGAAGAKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVSVTREKTKIIVTSDSNFSKRVSEVLDKEVLEETQCTGLAQSDCF. 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06724 101 FunFam 60S ribosomal protein L22-2 5 94 - -
Seca7g06724 101 Gene3D - 6 97 IPR038526 -
Seca7g06724 101 PANTHER 60S RIBOSOMAL PROTEIN L22 2 91 IPR002671 GO:0003735|GO:0005840|GO:0006412
Seca7g06724 101 Pfam Ribosomal L22e protein family 14 90 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06724 Seca-Chr7 169650676 169653097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06724 1 77 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 83.117 6.29e-42 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06724 K02891 - gmx:100790071 139.813