Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06723 ATGAGTCGAGGAGGTGCAGCTGGTGCCAAAGGGAAGAAGAAGGGTGTGACATTCACCATTGACTGCGCCAAGCCAGTGGAGGACAAGATCATGGACATTGCATCTCTCGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAGGCCGGTGCTCTCGGCGATACTGTCTCTGTTACACGCGAGAAGACCAAGATCACTGTCACTTCTGACAGCAACTTCTCCAAACGGTATCTGAAGTACTTGACAAAGAAGTACTTGAAGAAACACAATGTACGGGACTGGCTCAGAGTGATTGCTTCAAACAAGGATAGAAATATTTATGAACTTAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGAAGAAGATTAA 375 0.4587 MSRGGAAGAKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVSVTREKTKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED. 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06723 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Seca7g06723 124 Gene3D - 6 124 IPR038526 -
Seca7g06723 124 PANTHER 60S RIBOSOMAL PROTEIN L22 2 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Seca7g06723 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06723 Seca-Chr7 169645321 169647516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06723 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 88.710 5.41e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06723 K02891 - pop:18098657 218.779