Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06677 ATGTATCGGCTGAGGAGCTTGAGTTTGCAATTTGATCTCATTGTTTATGCACCGTATCGCTCTATTGAAGGTTTTATAAATGATATGGAGCATGGACAGGAATTTTGCAATGCCGGTGACGACCAACTTCAAATGCTCAAGACTTTGCAAGATACAGCTAGACTGGAAGTTGATAAAATGATGCTTACTGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCAGCATTGTGCAACTCAAATGCACTCCATAAAGTTATTGACTTTGATAGTTATCTAAGCAGCATTTTTTCCCGTCAGAATACCATGCATACAATGTCCGAGCTTTTTGAATCATTGAATGCGATTGATTCTTGGGTCAGAAAATACAAATTTCCTTCAGAGAAGGAATTGAAGCATATCAACCGGAAACTAAAGTCTTGTTGGGGTCTTAGCTCTCATGACGAGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCCAAAAAGAGCTCAAATGAAGCACAAAATGTGCCATCTCATGTCTAG 534 0.4064 MYRLRSLSLQFDLIVYAPYRSIEGFINDMEHGQEFCNAGDDQLQMLKTLQDTARLEVDKMMLTDAPLLFPPGQLALAALCNSNALHKVIDFDSYLSSIFSRQNTMHTMSELFESLNAIDSWVRKYKFPSEKELKHINRKLKSCWGLSSHDEGKKREKKSKHKSKKSSNEAQNVPSHV. 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06677 177 Gene3D - 16 124 - -
Seca7g06677 177 FunFam Cyclin h 16 124 - -
Seca7g06677 177 SUPERFAMILY Cyclin-like 18 146 IPR036915 -
Seca7g06677 177 Pfam Cyclin C-terminal domain 18 120 IPR031658 -
Seca7g06677 177 CDD CYCLIN_AcCycH_rpt2 16 143 - -
Seca7g06677 177 MobiDBLite consensus disorder prediction 146 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06677 Seca-Chr7 169109955 169113216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06677 8 122 Core Cell Cycle Gene Families AT5G27620 59.130 4.74e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06677 K06634 - gmx:100790589 280.026