Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06619 ATGGAAGTTAATTCTACTAACATTGCAGGGCCACCCTCTGTTGCTACAAAGAACCATACTTTCACACAACACCACTTAAATTCAGAACACCATAAACACAGCCATGACCATGTCCCCTTCAAAGCCATTCTCATAACCATTTCAGTGGTAGCCTCAGTTACAATCCTATTTATCATTTTTCTGGTTGTATGCTTGATCCGTCGGCAAAAATCTTCCAACCAGAATGAAACTTGCAAAGATGACAGTAGAGTACTTCATGACACAAGCAGCAGGCTCATAGCTTCAACAATGTTAAACTCTAATTCTAGCCCAGATGTGAAGGGTGGGTGTCTTTATGGGGGAAATTTGAGCAAGACACCAACACCTAAATTTAGAGGAGTTCAAGTGTTTACTTATAGGGAGCTAGAGGTTGCCACGGATGGATTCAGTGAAGCAAATGCGATTGGTAATGGAGGGGTTGGTTTGATGTATAAAGGAGTCTTAAGTGATGGCACTTTGGCAGCAATTAAGTTGCTGAGGAGTGAAGGTAAGCAAGGAGAGCGTGCATTCAGAATTGAGGTCGATCTTCTAAGCCGGTTGCACTCTCCTTATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAAAACCACAGGTTATTAATTTTTGAATACTTGCCCAATGGTACACTCCAACACCATCTTCACTCCCCCAATGATCAAACTCAACCGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCCCTGGAGTTCCTGCATGAACATGCAGTCTCACCTGTGATCCACCGAGACTTCAAGAGTAACAATGTTCTACTGGATCAAAATTTCCGTGCCAAGGTGTCAGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGGAATGGTCAAGTTTCCACCCGTGTGTTGGGGACCACTGGATATTTGGCACCAGAGTACGCCTCCACGGGTAAGCTCACTACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTCGAACTACTAACAGGACGTGTACCAGTTGACATTAAACGGGCCCCTGGAGAACACGTCCTTGTCTCTTGGGTTATTCATCAGGCTCTTCCTAGGTTGACAAACAGAGAAAAGGTGGTGGAAATGGTTGACCCCGCTCTACGCGGACAGTACTCAAAGAAGGATTTAATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCGGATTACAGGCCGCTCATGACAGATGTTGTACAATCATTGGTACCACTTGTCCGTAACACATCTTCTCTTGGTTCATCCAGTTCCCTAAGATTTCATAAACAAATACTAAGACCAAGTCATTAG 1335 0.4479 MEVNSTNIAGPPSVATKNHTFTQHHLNSEHHKHSHDHVPFKAILITISVVASVTILFIIFLVVCLIRRQKSSNQNETCKDDSRVLHDTSSRLIASTMLNSNSSPDVKGGCLYGGNLSKTPTPKFRGVQVFTYRELEVATDGFSEANAIGNGGVGLMYKGVLSDGTLAAIKLLRSEGKQGERAFRIEVDLLSRLHSPYLVELLGYCADQNHRLLIFEYLPNGTLQHHLHSPNDQTQPLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKSNNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWVIHQALPRLTNREKVVEMVDPALRGQYSKKDLIAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNTSSLGSSSSLRFHKQILRPSH. 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06619 444 FunFam Receptor-like serine/threonine-protein kinase ALE2 218 433 - -
Seca7g06619 444 CDD STKc_IRAK 148 420 - -
Seca7g06619 444 SUPERFAMILY Protein kinase-like (PK-like) 123 417 IPR011009 -
Seca7g06619 444 Pfam Protein kinase domain 143 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06619 444 Gene3D Transferase(Phosphotransferase) domain 1 218 433 - -
Seca7g06619 444 Gene3D Phosphorylase Kinase; domain 1 114 217 - -
Seca7g06619 444 FunFam Serine/threonine-protein kinase PBS1 111 217 - -
Seca7g06619 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Seca7g06619 444 PANTHER OS07G0668900 PROTEIN 83 426 - -
Seca7g06619 444 ProSiteProfiles Protein kinase domain profile. 142 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06619 Seca-Chr7 168107562 168111579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06619 41 437 Receptor kinase-like Gene Family AT3G58690 54.902 1.23e-148 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca7g06619 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06619 - - gmx:100809810 691.419