Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06608 ATGGCTTTGTTTCTGCCACCACTTTCTTTTTCAACTTCATATCTTAGCACGAGCACCATTGTTGCTCTCTGTGTATTTTTCACACTCCTCTGTGCTTGCATTATCATTGGCCATCTTCTGGAAGAGAATCGGTGGGCCAATGAATCCATCACTGCCCTCCTTCTGGGGTTGTGTTCTGGGGTGGTGGTGTTGCTGGTGACCAAGTTCCATAGTACCAAGATTCTAATATTCAGTGAAGATTTATTCTTCCTTTACTTGCTTCCACCAATTATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAGCAGTTCTTCAAGAATTTCACAATTATACTGCTGTTTGGGGTCCTTGGAACAGTTATTTCATTCTGTCTCATATCTGTAGGTGCCTTTCTGCTCACTAATAGGATTGGCATAGCTAACCTGGGCATAAAAGATCACCTAGCTATTGGTGCCATATTGTCAGCAACTGACTCAGTTTGTACATTGCAGGTTCTAAGTCAAGATGAAACCCCTTTGCTTTACAGTATTGTATTTGGAGAGGGAGTAGTAAATGACGCTACATCTATTGTTCTTTTCAATTCAATCCAATCACTTGACTTCAGTAGCATCGATGCTATTACAGCCTTGAAATTGTTGGGGACCTTCCTTTACCTCTTTTGCACTAGTACTGCCCTTGGCATAGTAGTTGGCCTTTTAAGTGCTTATATAATTAAAACACTTTACTTTGGAAGGCACTCTACAGATCGTGAAGTTGCACTCATGATGTTGATGGCTTATTTGTCATATATGATCGCTGAGCTTTTGAATCTCAGTGGGATTTTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACATGGCACAATGTTACAGGAAGCTCAAGGACAACAACCAAGCACTCCTTTGCAACTATCTCATTCATTGCTGAAACCTTTATATTTCTGTATGTTGGCATGGATGCTTTAGACATTGACAAATGGAAAAGAAGCAAAGCCAGGTAA 1005 0.404 MALFLPPLSFSTSYLSTSTIVALCVFFTLLCACIIIGHLLEENRWANESITALLLGLCSGVVVLLVTKFHSTKILIFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTIILLFGVLGTVISFCLISVGAFLLTNRIGIANLGIKDHLAIGAILSATDSVCTLQVLSQDETPLLYSIVFGEGVVNDATSIVLFNSIQSLDFSSIDAITALKLLGTFLYLFCTSTALGIVVGLLSAYIIKTLYFGRHSTDREVALMMLMAYLSYMIAELLNLSGILTIFFCGIVMSHYTWHNVTGSSRTTTKHSFATISFIAETFIFLYVGMDALDIDKWKRSKAR. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06608 334 PRINTS Na+/H+ exchanger signature 150 160 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g06608 334 PRINTS Na+/H+ exchanger signature 81 92 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g06608 334 PRINTS Na+/H+ exchanger signature 110 118 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g06608 334 PRINTS Na+/H+ exchanger signature 95 109 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Seca7g06608 334 Gene3D - 142 194 - -
Seca7g06608 334 PANTHER SODIUM/HYDROGEN EXCHANGER 22 327 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Seca7g06608 334 Pfam Sodium/hydrogen exchanger family 27 321 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06608 Seca-Chr7 168013055 168015910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06608 8 329 Antiporters AT3G05030 69.876 2.73e-164 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06608 K14724 - ccaj:109808094 544.273