Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06585 ATGAGTGAGAGGAAGTCAGGTGAGAAAAGAGAGAGGATGAAGAACATCTTCAAGAAGCTTCACATAGGGAGCAATCACGATCCTCATCGATCCAATGAAATTACGCCACCTGTACCCTCGACTTCATGCGCCGCCGAACACTCTCAAAATTCCGGCTCCTCTCCGGCAACTCCCTCTTCTGCGCCGTCGCCGTCGTCGTCGTCCACGCCAGCCGTCGCGCCGCCGGTGCCTGCGCTGGCCAATCGGCAAGACTTTTTCTCGTCGGAGGAGGAGTTTCAGGTGCAGCTAGCCCTAGCCATTAGCGCTTCCAATTCGGACTTCCGCGATGATCCCGAGAAGGATCAGATCCATGCAGCGACACTGCTGAGTTTGGGAGGCCATCGAATCGATTCGGTGAGGAATAAGGACGATGTGGCGGAGGCACTGTCGAGGCAGTACTGGGAATACAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTTTATGGACTCTATAATGATCCGGCGATGCAAGGAAAGATGCCGTCTCTAGCAGATCTTGAAGGAAACCCAGGAAGCTCTAACTTTGAAGTGGTCATAGTTAATCGAACAATTGATCCGGCCCTGGAAGAGCTGGCACAAATTGCACATTGTATTGCATTGGACTGCCCTGTCACAGATATTGGTATTTTGGTACAAAGGCTTGCTGAACTTGTTACAAACCATATGGGCGGTCCTGTAAAGGATGCTAATATTATATTGGCAAGATGGACGGAAACGAGTACAGAGTTAAGGACATCTCTTCACACAAGTGTATTGCCTCTTGGGTCCTTAAATATTGGGCTCTCCAGGCATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAACATTAAGATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTCGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGTCCCGTGGTACTGATATCTCCTATTCTGCTTTCAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCTGGAACACTTATCCCAGCTGATATTTTAAATACAAAGGATAATGCCTTTAAGTCTTACAATCCCAATATTTTACCTAGTTTGCCTTCCACTAAGGAAACTGGATTTTCTTACTCAAGACCTGTCCCACCATCGCACGGTGAAGGTAGTAGTCGAACTGCTGTGGTAAAAGGTCATTCGCCACCCTGGAATGGAAAATCACATGTTGAGAAGTCAGATTATATGCCTTCAAGCTTGGGTTTGAACAGAGACACTGGCGTTGGTCCTTCTAAAATTCCTAATAGAGGGACTCCTAACCAAGTGGAAAATATGCCACCTGCATATGGTACTTCTCTGTATAAAGGGACTCTTGGAATGAATGCAGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTACCATATGCTCAGAACAGCCCCAATGACTCTCAGAACCTTTTCGCAGATCTTAACCCATTCCTGATGAAAGGGACTGGGAAGCCCTCTGTGCATAATAAACCTGTGGAAAATAAACCTCCTGAGCTTCAGAGTACAAAAAACAATATTGTTTCTGGTCGACCTGTGGCACCGCTGATGTGGAAGAATCGTCATGCTTACAATGAAGTCCCCAAGAAAACTAATCATAACCCTAATGAATATAACCCTCCTTTATTTGTTTCCAATATTTCTTCTGCATCTGAAAGTTCTGATCTCCGTACTTCCAAATCATCATACAATACAAATTTAAATAATGATATAAATGCTCAGAACTTGACACAAGTTACTGGTTCAGTCTCACCATCTGGTGTAGGTGAATTGAACCGGATTGAGAATCTCAATGCTGATTTTAACAGGGGGGATTTGGAAAATTCTCAAAATGTCATGGTAGAGGCGGTTAAAGAAACTGAAAACATTGAAACCAGATATCTTGACCGGAGGAAATGCACACATGACAGATTCATGGGAAACAATTTGAAATTAAAAGATCCAGAGAGTCCTAGCTCTTCAATTGATTCCATTACAAACAGGGTCAATCAAATATTGGACGATGTAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGTCCTTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTATACCATGCGGACTGGAATGGCACAGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCGGGCGTTGCCTTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTGCGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACTCGGCCTCCCAATCTCTCAATCATTTCAGAGTTTCTTCCAAGAGGAAGCTTGTACCGAATTCTTCATCGCCCTAATTGTCAGATCGATGAGAAACGAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGTATGAACTGCTTACACACCAGCACACCTACAATTGTTCACCGAGATCTGAAGTCCCCAAATCTTTTGGTTGATAAGAATTGGAATGTTAAGGTATGTGATTTTGGGTTGTCACGCTTGAAGCACAACACATTTTTGTCTTCCAAATCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAGAAGTGTGATGTTTATAGTTTCGGAGTCATCCTATGGGAGCTTGCCACTCTAAGGTTGCCGTGGAGTGGAATGAATCCTATGCAAGTTGTTGGTGCTGTGGGTTTCCAAAATCGTCGACTTGAAATTCCTAAGGAAGTTGATCCTATAGTTGCCAGAATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGGCCCTCGTTTGCACAGCTCACAGTGGCACTAAAGCCCCTGCAGCGTCTGGTTATCCCATCTCATCAAGACCAGGTAGCTCCACCTGTGCCGCAGGAGATTTCTGTAAATTCTACCCCATGA 2946 0.4453 MSERKSGEKRERMKNIFKKLHIGSNHDPHRSNEITPPVPSTSCAAEHSQNSGSSPATPSSAPSPSSSSTPAVAPPVPALANRQDFFSSEEEFQVQLALAISASNSDFRDDPEKDQIHAATLLSLGGHRIDSVRNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGLYNDPAMQGKMPSLADLEGNPGSSNFEVVIVNRTIDPALEELAQIAHCIALDCPVTDIGILVQRLAELVTNHMGGPVKDANIILARWTETSTELRTSLHTSVLPLGSLNIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDERSRGTDISYSAFREFLVDLMAAPGTLIPADILNTKDNAFKSYNPNILPSLPSTKETGFSYSRPVPPSHGEGSSRTAVVKGHSPPWNGKSHVEKSDYMPSSLGLNRDTGVGPSKIPNRGTPNQVENMPPAYGTSLYKGTLGMNAVGDGTRLNVNVVPYAQNSPNDSQNLFADLNPFLMKGTGKPSVHNKPVENKPPELQSTKNNIVSGRPVAPLMWKNRHAYNEVPKKTNHNPNEYNPPLFVSNISSASESSDLRTSKSSYNTNLNNDINAQNLTQVTGSVSPSGVGELNRIENLNADFNRGDLENSQNVMVEAVKETENIETRYLDRRKCTHDRFMGNNLKLKDPESPSSSIDSITNRVNQILDDVDVGECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGVALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPIVARIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSHQDQVAPPVPQEISVNSTP. 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06585 981 ProSitePatterns Protein kinases ATP-binding region signature. 706 728 IPR017441 GO:0005524
Seca7g06585 981 Pfam Protein tyrosine and serine/threonine kinase 701 950 IPR001245 GO:0004672|GO:0006468
Seca7g06585 981 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 82 956 - -
Seca7g06585 981 MobiDBLite consensus disorder prediction 503 525 - -
Seca7g06585 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Seca7g06585 981 MobiDBLite consensus disorder prediction 1 28 - -
Seca7g06585 981 SUPERFAMILY Protein kinase-like (PK-like) 690 972 IPR011009 -
Seca7g06585 981 FunFam Serine/threonine-protein kinase isoform 1 691 778 - -
Seca7g06585 981 FunFam Serine/threonine-protein kinase CTR1 779 962 - -
Seca7g06585 981 MobiDBLite consensus disorder prediction 1 76 - -
Seca7g06585 981 MobiDBLite consensus disorder prediction 29 67 - -
Seca7g06585 981 ProSiteProfiles Protein kinase domain profile. 700 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06585 981 PRINTS Tyrosine kinase catalytic domain signature 923 945 IPR001245 GO:0004672|GO:0006468
Seca7g06585 981 PRINTS Tyrosine kinase catalytic domain signature 813 831 IPR001245 GO:0004672|GO:0006468
Seca7g06585 981 PRINTS Tyrosine kinase catalytic domain signature 879 901 IPR001245 GO:0004672|GO:0006468
Seca7g06585 981 PRINTS Tyrosine kinase catalytic domain signature 860 870 IPR001245 GO:0004672|GO:0006468
Seca7g06585 981 PRINTS Tyrosine kinase catalytic domain signature 774 787 IPR001245 GO:0004672|GO:0006468
Seca7g06585 981 CDD STKc_MAP3K-like 706 949 - -
Seca7g06585 981 MobiDBLite consensus disorder prediction 382 450 - -
Seca7g06585 981 SMART serkin_6 700 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06585 981 Pfam Ethylene-responsive protein kinase Le-CTR1 139 349 - -
Seca7g06585 981 MobiDBLite consensus disorder prediction 436 450 - -
Seca7g06585 981 Gene3D Transferase(Phosphotransferase) domain 1 779 961 - -
Seca7g06585 981 Gene3D Phosphorylase Kinase; domain 1 693 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06585 Seca-Chr7 167746783 167755979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06585 13 936 MAP Kinase Kinase Kinase AT1G08720 56.329 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Seca7g06585 PK_Tyr_Ser-Thr 1.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06585 - - aprc:113870732 1635.93