Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06573 ATGCCACCTGAGCAAAACGACGCCGTTCTTCCCGAAGAAGATCTCGACGACGACGACGAAACGCTAGAGGACGAAGAGGAAGAGGAGGAAGACGACGACGACGTTTTAGGCGAACCCGACGAAGACGAAGAAACTGAACCTTCTCCTTCCACCTCTTCCGCCCTCGCTGCCGTCACCGTAGCCGTGCCTTGTTCCGTCGTCTCAAACGCGTCAACGCCGACCGTCGTCGCCGAGCCAAAACGACAGCGCACGGAGCAAATGGAGGAGAAGAAGGCGTTGGAGGATTCGCGGAGACTGTTCCAGCGTCTGTGGACCGATGAAGACGAGATCGGGCTTTTGCAAGGGTTCTTGGAGTACACTTCGCAGCGAGGATCCTCTCATCACAACGACACCGCTTTGTTCTATGATCAAATCAAGTCCAAGCTTCAGCTCGGTTTCAACAAGAACCAGCTCGTCGAGAAGCTTCGCAGGTTGAAGAAGAAGTACCGCAACGTTCTCAACAAGATCGGCTCCGGCAAGGAGTTTTCCTTCAAGAGCCCTCACGATCAAGCCACCTTCGAAATTTCGCGCAAGATCTGGAGCAACACGCCTCCAATCGCCGGTCCCGTCGAAGATGACGACGAAATCAACCTTAATCCTAACCCTAACCCTAACCTCAATTTCTGTCTTACGACGTCGTTGAAGAATGAAGCGATGATTGAGAAGAAAACCCCGCCGTCGCGGAAGCGGTCGCGGTCTCGATTGGGGGAGAGGCGCGAGTTGAACTTGAATGATGGACCAGCGTTGAATAAGGATAATGATTATTATAATCATAATTGTATTAGCGATAATAATAATAATAACAATGATAATAATTGTAATGGTATTGGTAGGCATAGTGCACAGGGTTTGATTGAAGAGACGGTGAGGAGTTGTTTGACGCCGGTGTTGAAGGAGTTGGCGAGTAGTGCCATTGGAAATGGCCCTTTTGGTTTTGGGGGAAGAGGGTTTGGGGTTGGAGGGTTCGCATTGAATCACGCGCCATTGAGTTTGTTGGGTTTGGGGAGTGGGGAAATGGTGCGAGATGACAAGTGGAGGAAGCAACAGATTTTGGAGCTGGAAGTGTACTCCAGGCGTTTGGAGCTGGTGCAGGATGAGATCAAGGTTGCTCTGCAGGAGTTGCGATCAGGTGGAGCAGGTGGAGGGTGA 1188 0.5135 MPPEQNDAVLPEEDLDDDDETLEDEEEEEEDDDDVLGEPDEDEETEPSPSTSSALAAVTVAVPCSVVSNASTPTVVAEPKRQRTEQMEEKKALEDSRRLFQRLWTDEDEIGLLQGFLEYTSQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVLNKIGSGKEFSFKSPHDQATFEISRKIWSNTPPIAGPVEDDDEINLNPNPNPNLNFCLTTSLKNEAMIEKKTPPSRKRSRSRLGERRELNLNDGPALNKDNDYYNHNCISDNNNNNNDNNCNGIGRHSAQGLIEETVRSCLTPVLKELASSAIGNGPFGFGGRGFGVGGFALNHAPLSLLGLGSGEMVRDDKWRKQQILELEVYSRRLELVQDEIKVALQELRSGGAGGG. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06573 395 PANTHER BNAANNG10740D PROTEIN-RELATED 3 386 IPR007592 GO:0006355
Seca7g06573 395 MobiDBLite consensus disorder prediction 1 54 - -
Seca7g06573 395 MobiDBLite consensus disorder prediction 233 261 - -
Seca7g06573 395 Pfam Protein of unknown function, DUF573 100 194 IPR007592 GO:0006355
Seca7g06573 395 MobiDBLite consensus disorder prediction 234 258 - -
Seca7g06573 395 MobiDBLite consensus disorder prediction 9 47 - -
Seca7g06573 395 Coils Coil 148 168 - -
Seca7g06573 395 Coils Coil 366 386 - -
Seca7g06573 395 Coils Coil 12 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06573 Seca-Chr7 167581944 167583131 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06573 27 394 GeBP Transcription Factor Family AT5G28040 47.044 5.85e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Seca7g06573 DUF573 7.9e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06573 - - gmx:100786620 348.591