Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06558 ATGGCGGATTCTTCAAGCAACCCAAAGGAGCAGAAGACGCGCCTTTACCATCCATACCAAGACCTCAACGTTCCGATCCAGAAACTCTACAACCTCCCTACCTCGCCGGAGCACCTCTTCCCTGAAGAAGCCGCCAGGACGCACCGCTCATGGGGCGACAACCTCCAGTACTACACCGGCTTCGGCTACCTCTCCGGCGCCATCATCGGCGGTGCCAAGGGGACCGTCGAGGGTCTCAGGGCTGCCGAGTCCGGTGACTCGCTCAAGCTCCGACTCAACCGAGTTCTGAACTCGGGAGGTCAGGGAGGTCGCAGGCTCGGAAACTCGCTCGGAGTGTTGGGCTTGATCTTTGCGGGTTTGGAGAGCGCGATGATCCACTTCAGGGGCAGGGATGACTTGGTGAACAGCGCCGTCGCCGGACTTGGCACCGGAGCGCTTTACAGGGCGGCGGCGGGGCCGCGATCGGCTGCTATTGCGGGTGCCATCGGAGGAATCGCCGCTGCGGCCACGGTTGCCGGAAAACAAGCTTTGAAACGATATGTGCCGATATAA 552 0.6105 MADSSSNPKEQKTRLYHPYQDLNVPIQKLYNLPTSPEHLFPEEAARTHRSWGDNLQYYTGFGYLSGAIIGGAKGTVEGLRAAESGDSLKLRLNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHFRGRDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAATVAGKQALKRYVPI. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06558 183 PANTHER TIM23 25 170 IPR045238 GO:0022857
Seca7g06558 183 Pfam Tim17/Tim22/Tim23/Pmp24 family 57 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06558 Seca-Chr7 167358477 167359028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06558 4 179 Chloroplast and Mitochondria Gene Families AT1G17530 56.742 1.07e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06558 K17794 - gmx:100803835 279.256