Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06537 ATGTGGCAGTTAACAAGTGAAGACATACAAGGGATTGAATTTGGTTCTGAGAAAGAAGCATATGATTTCTATTCCAACTATGCTCGGTGCCATGGTTTTGCTGTAAGAAAAGATGATGTAGGTTATATTGGCAGAGGGTCTGGCAAAGTTAAAGTGATGCGTCAATTTGTTTGTAATAGAGAGGGGTTGAGGAATAAAAAACATTTGGAGAGGGTGGATCAAAAAAGAGAGTCTAAGGCTTTAACGTGA 249 0.3855 MWQLTSEDIQGIEFGSEKEAYDFYSNYARCHGFAVRKDDVGYIGRGSGKVKVMRQFVCNREGLRNKKHLERVDQKRESKALT. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06537 82 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 76 - -
Seca7g06537 82 Pfam FAR1 DNA-binding domain 22 78 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06537 Seca-Chr7 167104759 167105007 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g06537 FAR1 3.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06537 - - ccaj:109792835 104.76