Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g06524 ATGCAAACCAACTTGCTACTCTTCTATTGTTACATTGGCATCTCTCTTGTTTTTGCTGAGGGAGCTCAAGCTGTAGCAGATGATGAATTGTCAACTCTTCTCTCTATCAAATCCAGTATCATTGATCCAATGAATTATTTGAAGGATTGGCAACTACCAACCAATGTGACACAAAGAGGTTGGCTACATTGTAACTGGACTGGAGTAGGTTGCAACTCTGAAGGCTTTGTAGAGAGTCTTCACCTCTACAACATGAACCTTAGTGGTCATGTTTCAGACCACATCCAATCCCTTTCAAGTCTTTCTTTTTTCAACATAAGCTGCAACAACTTTGCTTCGAAACTTCCCAAATCACTGTCCAACCTCACCTCTCTGAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTTCCAACTGGTCTTGGAGGAGCTGCAGGGTTGAGATCAATTAATGCATCAAGCAATGATTTTTCAGGTCTTCTTCCTGAGGATATTGGAAATGCAACATTGCTTGAGAGCCTTGATTTTCGAGGGAGCTACTTTGTAAGTTCAATCCCCAGGAGTTTTAAAAATTTGCAGAAGCTCAAGTTTTTAGGCATTTCAGGCAATAACTTCACAGGGAGGATTCCAGGGTATCTTGGGGAACTCATTTCTCTGGAGACATTAATTCTAGGATACAATGAGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAACCTGACCAATCTTCAATACCTTGACTTGGCTGTAGGAAGTCTCAGTGGACAAATTCCACCTGAATTGGGTAAGCTGAAAAAACTCACTACAGTTTACTTATATCATAACAACTTCACAGGAAAAATTCCACCTCAACTTGGCAACATTATGTCACTAGAATTTCTGGACCTCTCTGACAATCAGATCTCAGGAGAGATTCCAGAAGAACTTGCTAAATTGGAAAACCTGCAGCTCTTGAATTTGATGACCAACAAACTAACTGGTCCTGTACCTGAGAAGCTTGGTGAATTGAAACATTTACAGGTGCTTGAGCTATGGAAAAATTCTTTAGAAGGTCCTTTGCCACTAAACCTTGGAAAAAATTCTCCTTTGCAGTGGTTGGATGTGTCCTCTAACTCATTGTCTGGTGAGATCCCTCCAGGTTTGTGTACTACAGGCAATCTAACTAAACTAATCCTCTTCAACAATTCCTTCTCGGGTTCCATTCCTAGTGGACTTTCAAACTGTTTATCACTGGTACGTGTAAGGATTCAGAACAATCTTATTTCTGGAACTATTCCAGCTGGCTTTGGGAACCTCCCAGGGCTTCAACGGCTGGAGTTGGCAAAGAACAACCTCACTGGACAAATTCCAATAGATATTACCTCATCCACATCACTCTCTTTCATTGATGTATCTTGGAACCACCTTGAGTCATCTCTACCTTCAGAAATTCTTTCCATTCCAACCCTTCAAACCTTCATTGCCTCTCACAACAACTTTGGAGGAATTATCCCAGCTGAGTTCCAGGACTGTCCATCTCTCTCTGTGCTGGATCTTTCAAACACAAATATCTCTGGAACAATCCCAGAAAGCATTGCTTCTTGTCAAAAGTTAGTCAACCTTAACCTCAGAAACAACCACTTGACAGGTGGAATCCCCAAATCAATCACAAACATGCCCACCTTATCTGTTCTTGATTTGTCCAACAATTCACTGACTGGTAGGATACCTGAAAACTTTGGAAGCTCCCCAGCTTTGGAAATGCTGAACCTATCCTTTAACAAACTTGAGGGCCCAGTACCCTCCAATGGGATTATGGTGACCATAAATCCTAATGATCTTATAGGCAATGCAGGTCTTTGTGGAGGCATTCTCCCTCCATGTTCTCAGAATTTGACTGTGACAAAACAGCGAAAGAGCTCACACAGTAGACACATCATTATTGGATTTGTGACTGGCATTTCAGTGATTTTATCTCTTGGTGCAGCATATATTGGTGGTAGATGTGTATACAAGAGATGGTACTTGTATAACAATTTTGTCCATGATTGGTTCAGACAGAGCAATGAAGATTGGCCCTGGAGGTTAGTAGCATTCCAAAGGATCAGTTTCACCAGCAGTGAGATCCTAACTTGCATAAAGGAATCAAATGTCATAGGCATGGGTGGCACTGGTATTGTTTACAAAGCTGAAATCCATAGACCTCACGTTACCGTAGCAGTGAAGAAACTATGGAGGTCACGAACAGACATAGAGAATGGGAATGATGTATTAAGAGAAGTGGAACTCCTAGGGAGACTTAGGCATAGAAATATTGTGAGACTATTGGGGTATGTGCACAATGAAAGGGATGTGATGATGGTTTACGAGTACATGCCTAATGGGAATCTTGGAACAGCACTGCATGGTGATCAATCTGCAAGGTTGCTTGTAGATTGGGTGTCAAGGTACAACATAGCTCTTGGAGTTGCACAAGGGCTGAACTACCTCCACCATGATTGTCACCCACCAGTTATTCACAGAGATATCAAGTCTAACAACATACTCCTTGACGCAAATTTGGAGGCAAGGATAGCAGATTTCGGGTTGGCGAGGATGATGATTCAAAAGAATGAGACAGTTACAATGGTGGCTGGATCTTATGGATATATAGCACCAGAATATGGATACACTCTGAAGGTTGACGAGAAGATTGACATATATAGTTATGGAGTAGTACTTTTGGAGCTCCTAACTGGCAAAAAGCCTTTAGACCCTGCGTTTGAAGAATCTGTGGACATAGTCGAATGGATAAGGAAGAAGAGAAACAACAAAGCCTTGTTAGAAGTACTAGATCCCACCATAGCTGGTCAGTGCAAACATGTCCAAGAAGAGATGCTTCTTGTACTCCGGATTGCACTTCTATGTACTGCGAAGCTTCCCAAGGAAAGACCATCCATGAGAGACATCATCACAATGCTTGGAGAGGCAAAGCCAAGAAGGAAAAGCGTTTGCCAAAATGGGGGACAACAAAGTAGCATGGAAAAGCCACCAGCTATCTTTAACACCTCCCCAGTAGCAAGTCTTTTGTAG 3057 0.4217 MQTNLLLFYCYIGISLVFAEGAQAVADDELSTLLSIKSSIIDPMNYLKDWQLPTNVTQRGWLHCNWTGVGCNSEGFVESLHLYNMNLSGHVSDHIQSLSSLSFFNISCNNFASKLPKSLSNLTSLKSFDVSQNYFTGSFPTGLGGAAGLRSINASSNDFSGLLPEDIGNATLLESLDFRGSYFVSSIPRSFKNLQKLKFLGISGNNFTGRIPGYLGELISLETLILGYNEFEGEIPAEFGNLTNLQYLDLAVGSLSGQIPPELGKLKKLTTVYLYHNNFTGKIPPQLGNIMSLEFLDLSDNQISGEIPEELAKLENLQLLNLMTNKLTGPVPEKLGELKHLQVLELWKNSLEGPLPLNLGKNSPLQWLDVSSNSLSGEIPPGLCTTGNLTKLILFNNSFSGSIPSGLSNCLSLVRVRIQNNLISGTIPAGFGNLPGLQRLELAKNNLTGQIPIDITSSTSLSFIDVSWNHLESSLPSEILSIPTLQTFIASHNNFGGIIPAEFQDCPSLSVLDLSNTNISGTIPESIASCQKLVNLNLRNNHLTGGIPKSITNMPTLSVLDLSNNSLTGRIPENFGSSPALEMLNLSFNKLEGPVPSNGIMVTINPNDLIGNAGLCGGILPPCSQNLTVTKQRKSSHSRHIIIGFVTGISVILSLGAAYIGGRCVYKRWYLYNNFVHDWFRQSNEDWPWRLVAFQRISFTSSEILTCIKESNVIGMGGTGIVYKAEIHRPHVTVAVKKLWRSRTDIENGNDVLREVELLGRLRHRNIVRLLGYVHNERDVMMVYEYMPNGNLGTALHGDQSARLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVTMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKKPLDPAFEESVDIVEWIRKKRNNKALLEVLDPTIAGQCKHVQEEMLLVLRIALLCTAKLPKERPSMRDIITMLGEAKPRRKSVCQNGGQQSSMEKPPAIFNTSPVASLL. 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g06524 1018 Gene3D Ribonuclease Inhibitor 234 332 IPR032675 -
Seca7g06524 1018 Gene3D Ribonuclease Inhibitor 146 233 IPR032675 -
Seca7g06524 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 365 627 - -
Seca7g06524 1018 FunFam MDIS1-interacting receptor like kinase 1 708 790 - -
Seca7g06524 1018 FunFam MDIS1-interacting receptor like kinase 1 791 1000 - -
Seca7g06524 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Seca7g06524 1018 MobiDBLite consensus disorder prediction 992 1018 - -
Seca7g06524 1018 SUPERFAMILY RNI-like 255 598 - -
Seca7g06524 1018 ProSiteProfiles Leucine-rich repeat profile. 292 315 IPR001611 GO:0005515
Seca7g06524 1018 Pfam Leucine rich repeat 413 471 IPR001611 GO:0005515
Seca7g06524 1018 Pfam Leucine rich repeat 532 591 IPR001611 GO:0005515
Seca7g06524 1018 SUPERFAMILY Protein kinase-like (PK-like) 702 982 IPR011009 -
Seca7g06524 1018 PRINTS Leucine-rich repeat signature 293 306 - -
Seca7g06524 1018 PRINTS Leucine-rich repeat signature 554 567 - -
Seca7g06524 1018 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 173 977 - -
Seca7g06524 1018 ProSitePatterns Protein kinases ATP-binding region signature. 714 738 IPR017441 GO:0005524
Seca7g06524 1018 Gene3D Ribonuclease Inhibitor 28 145 IPR032675 -
Seca7g06524 1018 Gene3D Phosphorylase Kinase; domain 1 707 790 - -
Seca7g06524 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 26 181 - -
Seca7g06524 1018 ProSiteProfiles Protein kinase domain profile. 708 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06524 1018 Gene3D Transferase(Phosphotransferase) domain 1 791 1004 - -
Seca7g06524 1018 Pfam Leucine rich repeat N-terminal domain 26 72 IPR013210 -
Seca7g06524 1018 SMART serkin_6 708 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06524 1018 SUPERFAMILY L domain-like 63 322 - -
Seca7g06524 1018 Pfam Protein kinase domain 710 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g06524 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 182 282 - -
Seca7g06524 1018 MobiDBLite consensus disorder prediction 989 1018 - -
Seca7g06524 1018 Gene3D Ribonuclease Inhibitor 333 631 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g06524 Seca-Chr7 166919944 166923906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g06524 5 1018 Receptor kinase-like Gene Family AT1G08590 64.438 0.0 1304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca7g06524 Pkinase 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g06524 - - gmx:100793873 1763.04